Job Description P23256 Confidence 100.00% Date Thu Jan 5 11:39:19 GMT 2012 Rank 48 Aligned Residues 358 % Identity 13% Template c3dc1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:kynurenine/alpha-aminoadipate aminotransferase PDBTitle: crystal structure of kynurenine aminotransferase ii complex with2 alpha-ketoglutarate Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.											.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80								.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																							.															.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																							.															.	.	.	.	.	.	.
Query Sequence		F	G	T	A	D	L	L	P	F	T	I	S	D	M	D	F	A	T	A	P	.	.	.	.	.	.	.	.	.	.	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	.	.	.	.	.	.	.	H	Y	T	A	I	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.																							.															.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																							.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	P	K	S	M	I	S	L	A	G	G	L	P	N	P	N	M	F	P	F	K	T	A	V	I	T	V	E	N	G	K	T	I	Q	F	G	E	E	M	M	K	R	A	L	Q	Y	S	P	S	A	G	I	P	E	L	L	S	W	L	K	Q	L	Q	I	K	L	H	N	P	P	T	I	H	Y	P	P	S	Q	G
Template Known Secondary structure					S	S											G	G	G		S									T	T	S														T	S				T	T																	T			T	T	T	T	S		G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.												.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.
Template Sequence		Q	M	D	L	C	V	T	S	G	S	Q	Q	G	L	C	K	V	F	E	M	I	I	N	P	G	D	N	V	L	L	D	E	P	A	Y	S	G	T	L	Q	S	L	H	P	L	G	C	N	I	I	N	V	A	S	D	E	S	G	.	.	.	.	I	V	P	D	S	L	R	D	I	L	S	R	W	K	P	E	D	A
Template Known Secondary structure									S	S															T	T							S	S										G	G	G	T										T	T		.	.	.	.											T	T	S		G	G	G	G
Template Predicted Secondary structure																																																												.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																																																															.
Template Conservation																																																																					.
Template Sequence		K	N	P	Q	K	N	T	P	K	F	L	Y	T	V	P	N	G	N	N	P	T	G	N	S	L	T	S	E	R	K	K	E	I	Y	E	L	A	R	K	Y	D	F	L	I	I	E	D	D	P	Y	Y	F	L	Q	F	N	K	F	R	V	P	T	F	L	S	M	D	.	V	D	G	R	V	I	R	A	D	S	F	S
Template Known Secondary structure		S		G	G	G				S							S	S		T	T	T																				T								T	T	T	T		B	S	S	S	S					S	G	G	G		.	S	S	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280			.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																.	.																																.
Query SS confidence																																																.	.																																.
Query Sequence		F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	.	.	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	.
Query Conservation																																																.	.																																.
Alig confidence																																																.	.																																.
Template Conservation
Template Sequence		I	I	S	S	G	L	R	I	G	F	L	T	G	P	K	P	L	I	E	R	V	I	L	H	I	Q	V	S	T	L	H	P	S	T	F	N	Q	L	M	I	S	Q	L	L	H	E	W	G	E	E	G	F	M	A	H	V	D	R	V	I	D	F	Y	S	N	Q	K	D	A	I	L	A	A	A	D	K	W	L	T	G
Template Known Secondary structure					S	T	T																				T	T	T	T		S	S																																															B	T
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.				.	.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.													.
Query SS confidence																																																.	.	.													.
Query Sequence		E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	.	.	.	E	E	G	R	G	F	V	R	L	N	A	G	.	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R
Query Conservation																																																.	.	.													.
Alig confidence																					.																											.	.	.													.
Template Conservation																					.
Template Sequence		L	A	E	W	H	V	P	A	A	G	M	F	L	W	I	K	V	K	G	.	I	N	D	V	K	E	L	I	E	E	K	A	V	K	M	G	V	L	M	L	P	G	N	A	F	Y	V	D	S	S	A	P	S	P	Y	L	R	A	S	F	S	S	A	S	P	E	Q	M	D	V	A	F	Q	V	L	A	Q	L	I	K
Template Known Secondary structure		T							S	B	S	S							T	T	.		S		S						T					T	T						G	G	G	G	S	S	S	T	T	S										S	S
Template Predicted Secondary structure																					.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		388
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		423

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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