Job Description P23256 Confidence 100.00% Date Thu Jan 5 11:39:19 GMT 2012 Rank 63 Aligned Residues 357 % Identity 15% Template c3d6kB_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative aminotransferase; PDBTitle: the crystal structure of a putative aminotransferase from2 corynebacterium diphtheriae Resolution 2.00 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.						.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																					.	.									.
Query SS confidence																							.	.	.	.	.																					.	.									.
Query Sequence		W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	D	M	.	.	.	.	.	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	.	.	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T
Query Conservation																							.	.	.	.	.																					.	.									.
Alig confidence																							.	.	.	.	.																					.	.									.													.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.
Template Sequence		T	A	K	Y	A	E	L	K	A	K	N	L	S	L	D	L	T	R	G	K	P	S	A	E	Q	L	D	L	S	N	D	L	L	S	L	P	G	G	D	F	R	T	K	D	G	V	D	C	R	N	Y	G	G	L	L	G	I	A	D	I	R	E	L	W	A	E	A	L	G	.	.	.	.	.	.	L	P	A	D	L
Template Known Secondary structure											T						S				S								T	T	G	G	G	G	G		S	T	T			B		T	T			B	T	T	S	S			S	S														T	.	.	.	.	.	.			G	G	G
Template Predicted Secondary structure																																																																							.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.							.	.	90	.	.
		90	.	.	.	.	.	.	.	.	.	100															.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	Y	G	P	S	V	I	Y	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation																																																																							.	.	.	.
Template Sequence		V	V	A	Q	D	G	S	S	L	N	I	X	F	D	L	I	S	W	S	Y	T	W	G	N	N	D	S	S	R	P	W	S	A	E	E	K	V	K	W	L	C	P	V	P	G	Y	D	R	H	F	T	I	T	E	H	F	G	F	E	X	I	N	V	P	X	T	D	E	G	.	.	.	.	P	D	X	G	V	V	R
Template Known Secondary structure						S	S																			T	T		S	S		G	G	G	S	S									S												T	T										T	T		.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.					.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																		.																								.																						.	.	.	.	.	.	.
Query SS confidence																		.																								.																						.	.	.	.	.	.	.
Query Sequence		A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	.	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	.	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	.	.	.	.	.	.	.	P	W	S	N	V	A	R	G	D	W	A
Query Conservation																		.																								.																						.	.	.	.	.	.	.
Alig confidence																		.																								.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	V	K	D	P	Q	V	K	G	X	W	T	V	P	V	F	G	N	P	T	G	V	T	F	S	E	Q	T	C	R	E	L	A	E	X	S	T	A	A	P	D	F	R	I	V	W	D	N	A	Y	A	L	H	T	L	S	D	E	F	P	I	V	H	N	V	I	E	F	A	Q	A	A	G	N	P	N	R	F	W
Template Known Secondary structure				T	T	S	T	T									S	S		T	T	T																		S	S	T	T								T	T	T	T		B	S	S	S																T		T	T
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		F	X	S	S	T	S	K	I	T	.	H	A	G	S	G	V	S	F	F	A	S	S	K	E	N	I	E	W	Y	A	S	H	A	N	V	R	G	I	G	P	N	K	L	N	Q	L	A	H	A	Q	F	F	G	D	V	A	G	L	K	A	H	X	L	K	H	A	A	S	L	A	P	K	F	E	R	V	L	E	I	L
Template Known Secondary structure						S	T	T	T	S	.		T	T	S	S																							S																S
Template Predicted Secondary structure											.
Template SS confidence
		249	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		307	.	.				310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.					.	360	.	.	.	.	.	.	.	.	.		370	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.																																																		.	.	.	.												.
Query SS confidence					.	.	.																																																		.	.	.	.												.
Query Sequence		N	A	A	.	.	.	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	.	.	.	.	E	G	R	G	F	V	R	L	N	A	G	.	C	P	R	S	K	L	E	K	G
Query Conservation					.	.	.																																																		.	.	.	.												.
Alig confidence					.	.	.																						.	.														.													.	.	.	.												.
Template Conservation																													.	.														.
Template Sequence		D	S	R	L	S	E	Y	G	V	A	K	W	T	S	P	T	G	G	Y	F	I	S	V	D	V	V	P	.	.	G	T	A	S	R	V	V	E	L	A	K	E	A	.	G	I	A	L	T	G	A	G	S	S	F	P	L	H	N	D	P	N	N	E	N	I	R	L	A	P	S	L	P	P	V	A	E	L	E	V	A
Template Known Secondary structure						G	G	G		S							S	B	S	S							S	T	.	.	T												T	.	T						T	T	T	T	S	G	G	G			T	T	S								S	S	S
Template Predicted Secondary structure																													.	.														.
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.		.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		379	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	G	L	I	N	A	I	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		X	D	G	F	A	T	C	V	L	X
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		405	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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