Job Description P23256 Confidence 100.00% Date Thu Jan 5 11:39:19 GMT 2012 Rank 69 Aligned Residues 326 % Identity 17% Template c3bwnF_ PDB info PDB header:transferase Chain: F: PDB Molecule:l-tryptophan aminotransferase; PDBTitle: l-tryptophan aminotransferase Resolution 2.25 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.														.	.	.	.	.	.
Query SS confidence																															.	.	.	.														.	.	.	.	.	.
Query Sequence		T	A	D	L	L	P	F	T	I	S	D	M	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	.	.	.	.	H	G	V	F	G	Y	S	R	W	K	N	D	E	.	.	.	.	.	.	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V
Query Conservation																															.	.	.	.														.	.	.	.	.	.
Alig confidence																															.	.	.	.														.	.	.	.	.	.
Template Conservation
Template Sequence		S	D	F	V	V	N	L	D	H	G	D	P	T	A	Y	E	E	Y	W	R	K	M	G	D	R	C	T	V	T	I	R	G	C	D	L	M	S	Y	F	S	D	M	T	N	L	C	W	F	L	E	P	E	L	E	D	A	I	K	D	L	H	G	V	V	G	N	A	A	T	E	D	R	Y	I	V	V	G	T	G	S
Template Known Secondary structure				S					S	S				G	G	G								G	G	G	G						T	T	T	T		S	S		S		T	T	S	S	S	T	T	S																	S	B			T	T	S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.					.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	.	.	.	.	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	L	C	Q	A	A	V	H	A	L	S	S	L	A	R	S	Q	P	V	S	V	V	A	A	A	P	F	Y	S	T	Y	V	E	E	T	T	Y	V	R	S	G	M	Y	K	W	E	G	D	A	W	G	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	K	K	G	P	Y	I	E	L	V	T	S	P	N
Template Known Secondary structure																S	S	S	S	S							S	S											T	T			T	T							S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.				S	S								S	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.														.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		N	P	D	G	T	I	R	E	.	.	.	.	.	.	.	.	.	.	.	.	T	V	V	A	K	V	I	H	D	F	A	Y	Y	W	P	H	Y	T	P	.	.	.	.	.	.	I	T	R	R	Q	D	H	D	I	M	L	F	T	F	S	K	I	T	G	H	A	G	S	R	I	G	W	A	L	V	K	D	K	E	V
Template Known Secondary structure		T	T	T						.	.	.	.	.	.	.	.	.	.	.	.											T	T		S	T	T	T	S		.	.	.	.	.	.			S		B			S													G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.													.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.							.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.									.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.																																.
Query SS confidence																															.	.	.	.	.	.	.	.																																.
Query Sequence		R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	.	.	.	.	.	.	.	.	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	.	L	N	W	Q	I	P	Q	S	T	Y	L
Query Conservation																															.	.	.	.	.	.	.	.																																.
Alig confidence																															.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		A	K	K	M	V	E	Y	I	I	V	N	S	I	G	V	S	K	E	S	Q	V	R	T	A	K	I	L	N	V	L	K	E	T	C	K	S	E	S	E	S	E	N	F	F	K	Y	G	R	E	M	M	K	N	R	W	E	K	L	R	E	V	V	K	E	S	D	A	F	T	L	P	K	Y	P	E	A	F	C	N	Y
Template Known Secondary structure														S	S																					T			S	T	T	T	S																						T	S	S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		324	.	.	.	.	.	330							.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.
Query Sequence		A	W	L	D	L	R	P	.	.	.	.	.	.	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N
Query Conservation									.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.																												.
Template Conservation																																										.
Template Sequence		F	G	K	S	L	E	S	Y	P	A	F	A	W	L	G	T	K	E	E	T	D	L	V	S	E	L	R	R	H	K	V	M	S	R	A	G	E	R	C	G	.	S	D	K	K	H	V	R	V	S	M	L	S	R	E	D	V	F	N	V	F	L	E	R	L	A	N
Template Known Secondary structure		T	T								S							S	S	S									T	T	T						T	G	G	G	T	.	S		T	T						S		S
Template Predicted Secondary structure																																										.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.		.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions