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Job DescriptionP23256
Confidence35.81%DateThu Jan 5 11:39:19 GMT 2012
Rank252Aligned Residues81
% Identity20%Templatec3blpX_
PDB info PDB header:hydrolaseChain: X: PDB Molecule:alpha-amylase 1; PDBTitle: role of aromatic residues in human salivary alpha-amylase
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   108.110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  SETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPT. . . . . . . . . . . .
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Template Sequence  TQQGRTSIVHLFEW. . . . . . . . . . . . . . . . . . . . . . . . RWVDIALECERYLAPKGFGGVQVSPPNENVAIHNPFRPWWER
Template Known Secondary structure 

TT

TT
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TTTTTT




S
BB

TTTTS
GGGG
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   6...10......... 20.........30.........40.........50.........60.
 
   176...180.........190.........200.........210..
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Query Sequence  . . . . . . . . . GKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ
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Template Sequence  YQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMCGNAV
Template Known Secondary structure  GSBS
S
S
BTTB
TT


STTS
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   62.......70.........80.........90.........100.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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