Job Description P23256 Confidence 99.91% Date Thu Jan 5 11:39:19 GMT 2012 Rank 182 Aligned Residues 322 % Identity 14% Template c3aemD_ PDB info PDB header:lyase Chain: D: PDB Molecule:methionine gamma-lyase; PDBTitle: reaction intermediate structure of entamoeba histolytica methionine2 gamma-lyase 1 containing michaelis complex and methionine imine-3 pyridoxamine-5'-phosphate Resolution 2.20 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.																				.
Query SS confidence																.	.	.																				.
Query Sequence		T	I	S	D	M	D	F	A	T	A	P	C	I	I	.	.	.	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E
Query Conservation																.	.	.																				.
Alig confidence																.	.	.																				.																		.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		S	H	A	Y	P	I	F	Q	T	S	T	F	C	F	D	S	T	Q	Q	G	A	D	L	F	M	G	K	G	E	G	H	I	Y	S	R	L	G	N	P	T	V	E	Q	F	E	E	M	V	C	S	I	E	G	A	.	.	.	.	A	G	S	A	A	F	G	S	G	M	G	A	I	S	S	S	T	L	A	F	L	Q
Template Known Secondary structure			S	S							S	B				S	S									T	T		S	S			S	B	T	T	T																	T		.	.	.	.	S						S	S										T	T	T
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		1521	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.					.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																.	.	.	.
Query SS confidence																.	.	.	.
Query Sequence		T	G	E	G	V	V	I	H	T	P	A	Y	D	A	.	.	.	.	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E
Query Conservation																.	.	.	.
Alig confidence																.	.	.	.																			.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.																											.	.	.	.
Template Sequence		K	G	D	H	L	I	A	G	D	T	L	Y	G	C	T	V	S	L	F	T	H	W	L	P	R	F	G	I	E	V	D	L	I	D	T	S	.	.	.	.	.	.	.	.	D	V	E	K	V	K	A	A	W	K	P	N	T	K	M	V	Y	L	E	S	P	A	N	P	T	C	.	.	.	.	K	V	S	D	I	K
Template Known Secondary structure		T	T							S	S																T	T								T	T	.	.	.	.	.	.	.	.	S										T	T								S	S		T	T	T		.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.																											.	.	.	.
Template SS confidence
		1597	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.									.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.					.	1660	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G
Query Conservation
Alig confidence																						.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.
Template Sequence		G	I	A	V	V	C	H	E	R	G	A	R	L	V	V	D	A	T	F	T	.	.	.	.	.	.	.	S	P	C	F	L	K	P	L	E	L	G	A	D	I	A	L	H	S	V	S	K	Y	I	N	G	H	G	D	V	I	G	G	V	S	S	A	K	T	A	E	D	I	A	T	I	K	F	Y	R	K	D	A	G
Template Known Secondary structure											T								T	T	T	.	.	.	.	.	.	.		T	T	T			G	G	G	G	T		S						T	T	T	T	T	T		S	S	S									S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.
Template SS confidence
		1665	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.								.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.																	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	Y	L	A	W	L	D	L	R
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence		S	L	M	A	P	M	D	A	F	L	C	A	R	G	M	K	T	.	.	.	.	.	L	P	I	R	M	Q	I	H	M	E	N	G	L	K	V	A	K	F	L	E	Q	H	E	K	I	V	K	V	N	H	P	G	L	E	S	F	P	G	H	D	I	A	K	K	Q	M	T	G	Y	G	S	T	F	L	F	E	M	K
Template Known Secondary structure																	T	T	.	.	.	.	.																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							S
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		1738	.	1740	.	.	.	.	.	.	.	.	.	1750	.	.	.	.						.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360																						.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	F	V	R	L	N	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation			.												.																																																	.	.
Template Sequence		S	.	F	E	A	A	K	K	L	M	E	H	L	.	K	V	C	T	L	A	V	S	L	G	C	V	D	T	L	I	E	H	P	A	S	M	T	H	A	A	V	P	E	N	I	M	R	K	Q	G	I	T	P	E	L	V	R	I	S	V	G	I	.	.	E	N	V	D	D	I	I	A	D	L	K	Q	A	L	E
Template Known Secondary structure		S	.									T	S		.	S	S	S				S					S	S						T	T	T	T	T	T	T	T	S									T			T	T								S	.	.	S
Template Predicted Secondary structure			.												.																																																	.	.
Template SS confidence
		1813		.	.	.	.	.	.	1820	.	.	.	.		.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.			.	.	.	.	.	.	.	1880	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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