Job Description P23256 Confidence 100.00% Date Thu Jan 5 11:39:19 GMT 2012 Rank 31 Aligned Residues 384 % Identity 15% Template c2zc0C_ PDB info PDB header:transferase Chain: C: PDB Molecule:alanine glyoxylate transaminase; PDBTitle: crystal structure of an archaeal alanine:glyoxylate aminotransferase Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.		.	.	.	70
Predicted Secondary structure											.	.	.															.	.	.	.																.	.																		.	.										.
Query SS confidence											.	.	.															.	.	.	.																.	.																		.	.										.
Query Sequence		D	F	S	K	V	V	D	R	H	.	.	.	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	.	.	.	.	G	T	A	D	L	L	P	F	T	I	S	D	M	D	F	.	.	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	.	.	V	F	G	Y	S	R	W	K	N	.	D	E	F	L
Query Conservation											.	.	.															.	.	.	.																.	.																		.	.										.
Alig confidence											.	.	.															.	.	.	.																.	.																		.	.										.
Template Conservation
Template Sequence		D	Y	T	K	Y	L	A	G	R	A	N	W	I	K	G	S	A	L	A	D	V	M	K	K	A	S	E	L	Q	K	K	G	V	K	L	I	S	L	A	A	G	D	P	D	P	E	L	I	P	R	A	V	L	G	E	I	A	K	E	V	L	E	K	E	P	K	S	V	M	Y	T	P	A	N	G	I	P	E	L	R
Template Known Secondary structure			G	G	G	G	S		G	G	G	G	G																	T	T	S	S						S							T	T	T	S																	G	G	G	G	S				T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	L	A	A	F	L	K	K	Y	D	H	L	E	V	S	P	E	N	I	V	I	T	I	G	G	T	G	A	L	D	L	L	G	R	V	L	I	D	P	G	D	V	V	I	T	E	N	P	S	Y	I	N	T	L	L	A	F	E	Q	L	G	A	K	I	E	G	V	P	V	D	N	D	G	M	R	V	D	L	L
Template Known Secondary structure												S						G	G	G																					T	T								S											T	T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		151	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.
Predicted Secondary structure											.	.																																																																.
Query SS confidence											.	.																																																																.
Query Sequence		M	G	K	L	E	A	V	L	A	.	.	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	.	G	D	W	A	L
Query Conservation											.	.																																																																.
Alig confidence											.	.																																																																.
Template Conservation
Template Sequence		E	E	K	I	K	E	L	K	A	K	G	Q	K	V	K	L	I	Y	T	I	P	T	G	Q	N	P	M	G	V	T	M	S	M	E	R	R	K	A	L	L	E	I	A	S	K	Y	D	L	L	I	I	E	D	T	A	Y	N	F	M	R	Y	E	G	G	D	I	V	P	L	K	A	L	D	N	E	G	R	V	I	V
Template Known Secondary structure											T	T											S	S		T	T	T																				T								T	T	T	T		B	S	S		S	S				G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		A	G	T	L	S	K	V	L	G	T	G	F	R	I	G	W	I	I	.	A	E	G	E	I	L	K	K	V	L	M	Q	K	Q	P	I	D	F	C	A	P	A	I	S	Q	Y	I	A	L	E	Y	L	K	R	G	Y	F	E	K	Y	H	L	E	G	A	L	L	G	Y	K	E	K	R	D	I	M	L	K	A	L	E
Template Known Secondary structure					S						S	S	S							.														T	T	T	T	S	S	S														T	T						T	T	T	T
Template Predicted Secondary structure																				.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.			.	360	.	.	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																					.	.													.
Query SS confidence																																																					.	.													.
Query Sequence		A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	.	.	E	G	R	G	F	V	R	L	N	A	G	C	.	P	R	S	K	L	E	K	G	V	A	G	L	I	N
Query Conservation																																																					.	.													.
Alig confidence																									.																												.	.													.
Template Conservation																									.
Template Sequence		N	H	L	P	N	A	E	F	T	K	P	I	A	G	M	F	V	M	F	F	L	P	E	.	G	A	D	G	I	S	F	A	N	E	L	M	E	R	E	G	V	V	V	V	P	G	K	P	F	Y	T	D	E	S	G	K	N	A	I	R	L	N	F	S	R	P	S	K	E	E	I	P	I	G	I	K	K	L	A	K
Template Known Secondary structure					S	S	S						S	B	S	S							S	T	.	T													T	T					B			G	G	G		S	S	S			T	T							S	S	S		T	T
Template Predicted Secondary structure																									.
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.
		385	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	K	E
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions