Job Description P23256 Confidence 99.97% Date Thu Jan 5 11:39:19 GMT 2012 Rank 104 Aligned Residues 335 % Identity 14% Template c2yrrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 Resolution 1.86 Å

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		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	P	F	T	I	S	D	M	D	F	A	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E
Query Conservation
Alig confidence									.	.															.	.	.	.
Template Conservation									.	.															.	.	.	.
Template Sequence		M	L	L	L	T	P	G	.	.	P	T	P	I	P	E	R	V	Q	K	A	L	L	R	.	.	.	.	P	M	R	G	H	L	D	P	E	V	L	R	V	N	R	A	I	Q	E	R	L	A	A	L	F	D	P	G	E	G	A	L	V	A	A	L	A	G	S	G	S	L	G	M	E	A	G	L	A	N	L	D	R
Template Known Secondary structure						S	S	S	.	.	S									G	G	G	G	S	.	.	.	.					T	T																							T	T							S	S												T		S
Template Predicted Secondary structure									.	.															.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.			.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D
Query Conservation
Alig confidence																																				.	.	.																																			.	.	.
Template Conservation																																				.	.	.																																			.	.	.
Template Sequence		G	P	V	L	V	L	V	N	G	A	F	S	Q	R	V	A	E	M	A	A	L	H	G	L	D	P	E	V	L	D	F	P	P	G	.	.	.	E	P	V	D	P	E	A	V	A	R	A	L	K	R	R	R	Y	R	M	V	A	L	V	H	G	E	T	S	T	G	V	L	N	P	.	.	.	A	E	A	I	G	A
Template Known Secondary structure										S													T	T										T	T	.	.	.	S														S			S						S			T	T	T	T					.	.	.
Template Predicted Secondary structure																																				.	.	.																																			.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.				.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.														.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	A	Y
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.																				.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.																				.
Template Sequence		L	A	K	E	A	G	A	L	F	F	L	D	A	V	T	T	L	G	M	L	P	F	S	M	R	.	.	.	.	.	.	A	M	G	V	D	Y	A	F	T	G	S	Q	K	C	L	S	A	P	P	.	G	L	A	P	I	A	A	S	L	E	A	R	K	A	F	T	G	K	R	G	W	Y	L	D	L	A	R	V	A
Template Known Secondary structure							T								T	T	T	T	T	T	S						.	.	.	.	.	.			T		S						T	T	S	T	T				S	.	S																		S		S	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.																				.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.							.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N
Query Conservation
Alig confidence																																																																												.
Template Conservation																																																																												.
Template Sequence		E	H	W	E	R	G	G	Y	H	H	T	T	P	V	L	L	H	Y	A	L	L	E	A	L	D	L	V	L	E	E	G	V	A	A	R	E	R	R	A	R	E	V	Y	A	W	V	L	E	E	L	K	A	R	G	F	R	P	Y	P	K	A	S	P	L	P	T	V	L	V	V	R	P	P	E	.	G	V	D	A	D
Template Known Secondary structure					T	T				S	S																																											T	T				S		S	S	S	B		T	T								T	.	T
Template Predicted Secondary structure																																																																												.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.		.	.	.	.	300
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.				.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	.	.	.	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R
Query Conservation																																	.	.	.
Alig confidence											.													.	.								.	.	.
Template Conservation											.													.	.
Template Sequence		R	L	V	R	A	L	Y	A	E	.	G	V	A	V	A	G	G	I	G	P	T	R	.	.	G	Q	V	L	R	L	G	L	M	G	E	G	A	R	R	E	A	Y	Q	A	F	L	K	A	L	D	R	A	L	A
Template Known Secondary structure										T	.	T								G	G	G	T	.	.	T	T							S	G	G	G	S
Template Predicted Secondary structure											.													.	.
Template SS confidence
		301	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions