Job Description P23256 Confidence 99.94% Date Thu Jan 5 11:39:19 GMT 2012 Rank 156 Aligned Residues 292 % Identity 11% Template c2x3lA_ PDB info PDB header:lyase Chain: A: PDB Molecule:orn/lys/arg decarboxylase family protein; PDBTitle: crystal structure of the orn_lys_arg decarboxylase family2 protein sar0482 from methicillin-resistant staphylococcus3 aureus Resolution 2.00 Å

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		61	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A
Query Conservation								.
Alig confidence								.											.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.
Template Sequence		H	H	P	E	E	V	I	L	K	S	M	K	Q	V	E	K	H	.	.	.	.	.	.	.	.	S	D	Y	D	G	Y	F	L	V	N	G	T	T	S	G	I	L	S	V	I	Q	S	F	S	Q	K	K	G	D	I	L	M	A	R	N	V	H	K	S	V	L	H	A	L	D	I	S	Q	Q	E	G	H	F	I	E
Template Known Secondary structure		T	S		S	S											S		.	.	.	.	.	.	.	.	T	T							S	S												T	T	T	T	S	S	S						T	T													T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.																		.									.	.	.
Template Conservation									.	.	.	.	.	.	.	.																		.									.	.	.
Template Sequence		T	H	Q	S	P	L	T	.	.	.	.	.	.	.	.	N	H	Y	N	K	V	N	L	H	K	L	V	V	L	T	Y	P	.	N	Y	Y	G	E	T	F	N	.	.	.	V	E	E	V	I	K	S	L	H	Q	L	N	I	P	V	L	I	D	E	A	H	G	A	H	F	G	L	Q	G	F	P	D	S	T	L	N
Template Known Secondary structure						T	T	T	.	.	.	.	.	.	.	.	S	S														S	S	.		T	T	S					.	.	.											T	T								T	T		T	T	T	T	S	T	T	S				G	G	G
Template Predicted Secondary structure									.	.	.	.	.	.	.	.																		.									.	.	.
Template SS confidence
		125	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L
Query Conservation
Alig confidence						.	.																												.	.																																						.	.	.
Template Conservation						.	.																												.	.																																						.	.	.
Template Sequence		Y	Q	A	D	.	.	Y	V	V	Q	S	F	H	T	L	P	A	L	T	M	G	S	V	L	Y	I	H	K	N	A	P	Y	R	.	.	E	N	I	I	E	Y	L	S	Y	F	Q	T	S	S	P	S	Y	L	I	M	A	S	L	E	S	A	A	Q	F	Y	K	T	Y	D	S	T	L	.	.	.	F	F	A	K	R
Template Known Secondary structure		G	T		S	.	.										S	S		T	T								T	T		T	T		.	.											S		S	S																								.	.	.
Template Predicted Secondary structure						.	.																												.	.																																						.	.	.
Template SS confidence
		200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.				.	.	270	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	G	C	P	R	S	K	L	E	K	G	V
Query Conservation
Alig confidence												.	.																			.	.												.												.	.	.	.	.	.
Template Conservation												.	.																			.	.												.												.	.	.	.	.	.
Template Sequence		A	Q	L	I	E	C	L	E	N	K	.	.	G	F	E	M	L	Q	V	D	D	P	L	K	L	L	I	K	Y	E	.	.	G	F	T	G	H	D	I	Q	N	W	F	.	M	N	A	H	I	Y	L	E	L	A	D	.	.	.	.	.	.	D	Y	Q	A	L	A	I	L	P	L	W	H	H	D	D	T	Y	L	F
Template Known Secondary structure												.	.	T							S	S	T	T							T	.	.	T	S										.			T	T				S				.	.	.	.	.	.	S	S											T	T
Template Predicted Secondary structure												.	.																			.	.												.												.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.			.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		380	.	.	.	.	.	.	.	.	.	390
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	I	N	A	I	R	A	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S	L	L	R	K	I	E	D	M	I
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions