Job Description P23256 Confidence 100.00% Date Thu Jan 5 11:39:19 GMT 2012 Rank 94 Aligned Residues 361 % Identity 12% Template c2ordA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution Resolution 1.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.						.
Query SS confidence																																					.	.						.
Query Sequence		F	D	F	S	K	V	V	D	R	H	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	.	.	D	M	D	F	A	.	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S
Query Conservation																																					.	.						.
Alig confidence											.										.	.	.	.	.												.	.						.																		.
Template Conservation											.										.	.	.	.	.																																					.
Template Sequence		S	R	F	P	A	T	F	V	Y	.	G	K	G	S	W	I	Y	D	E	.	.	.	.	.	K	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	.	H	C	S	N	L	F	W	N	R	P	Q	X	E	L	A	E	L	L	S
Template Known Secondary structure					S						.			B	T					T	.	.	.	.	.	T							S	S					T		T	T		B	T																S	.				T	T	S
Template Predicted Secondary structure											.										.	.	.	.	.																																					.
Template SS confidence
		8	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.								.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.																			.																										.
Query SS confidence																														.	.	.	.	.	.	.																			.																										.
Query Sequence		T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	.	.	.	.	.	.	.	W	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	.	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	.
Query Conservation																														.	.	.	.	.	.	.																			.																										.
Alig confidence				.	.	.	.																							.	.	.	.	.	.	.																			.																										.
Template Conservation				.	.	.	.
Template Sequence		K	N	.	.	.	.	T	F	G	G	K	V	F	F	A	N	T	G	T	E	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F
Template Known Secondary structure			T	.	.	.	.	T	T	S							S	S																					T	T								B	T					S	S							S	B						G	G	G		S			T	T
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		81	.					.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A
Query Conservation		.	.	.
Alig confidence		.	.	.																																																																		.	.	.
Template Conservation																																																																						.	.	.
Template Sequence		E	F	N	N	V	E	D	L	R	R	K	X	S	E	D	V	C	A	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	C	G	X	G	R	T	G	K	L	F	.	.	.	A	Y	Q	K	Y	G	V	V	P
Template Known Secondary structure			T	T											T	T								S				T	T	T																				T								T	T	T	T	T	T	T	T	S	S	S	S	.	.	.						T
Template Predicted Secondary structure																																																																						.	.	.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M
Query Conservation
Alig confidence												.																.	.
Template Conservation												.																.	.
Template Sequence		D	V	L	T	T	A	K	G	L	G	.	G	G	V	P	I	G	A	V	I	V	N	E	R	A	N	.	.	V	L	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K
Template Known Secondary structure		S						G	G	G	G	.	T	T	S									S	T	T		.	.				T	T	S	S			S	S	T	T																T	S	T	T
Template Predicted Secondary structure												.																.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																														.	.
Query SS confidence																																																														.	.
Query Sequence		N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	.	.	N	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N
Query Conservation																																																														.	.
Alig confidence					.	.																				.															.								.	.	.	.	.	.								.	.
Template Conservation					.	.																				.															.								.	.	.	.	.	.
Template Sequence		E	E	Y	.	.	D	V	V	A	D	V	R	G	X	G	L	X	I	G	I	Q	F	R	E	.	E	V	S	N	R	E	V	A	T	K	C	F	E	N	.	K	L	L	V	V	P	A	.	.	.	.	.	.	G	N	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D	L	A	V	E	T	L	K	K
Template Known Secondary structure					.	.	T	T								T	T								T	.	T	S												T	.	T							.	.	.	.	.	.	T	T	T								T	T
Template Predicted Secondary structure					.	.																				.															.								.	.	.	.	.	.
Template SS confidence
		311	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.		.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.	.							.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		385	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	Q	G	I
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions