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Job DescriptionP23256
Confidence99.88%DateThu Jan 5 11:39:19 GMT 2012
Rank207Aligned Residues343
% Identity13%Templatec2jisA_
PDB info PDB header:lyaseChain: A: PDB Molecule:cysteine sulfinic acid decarboxylase; PDBTitle: human cysteine sulfinic acid decarboxylase (csad) in2 complex with plp.
Resolution1.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60...... ...70.........80.........90.........100.........
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Query Sequence  MDFATAPCIIEALNQRLMHGVFGYSRWKN. DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE. . . . . . .
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Template Sequence  SGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGW. . SSGDGIFCPGGSISNMYAVNLARYQRYPDCK
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TT
TTT
T
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TT
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   95....100.........110.........120.........130.........140. ........150.........160.........170..
 
   110.........120.........130.........140.........150.........160 .........170.......
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Query Sequence  . . . . . . . TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAK. . . . . PECKIMLLCSPQNPTGK
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Template Sequence  QRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGA
Template Known Secondary structure 
GGGS

TTS
TTTS
GGG
B
TTS
B
TT
BS
TTT

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   173......180.........190.........200.........210.........220.........230.........240.........250..
 
   178.180.........190.........200.........210.........220.........230.........240.........250.......
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Query Sequence  VWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYL
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Template Sequence  FDP. . . LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG. LQCSALLLQDTSNLLKRC
Template Known Secondary structure  B

...T
TTGGGGGG
TTTGGGGTTGGG
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TTSTT


.S

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   253.. ....260.........270.........280.........290.........300.........310 .........320........
 
   258.260...... ...270.........280.........290.........300.........310.........320........
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Query Sequence  SALKGRDGL. . . . . . . . . SSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDL
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Template Sequence  HGSKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEM. KKREGFELVMEPEFVNVCFWF
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S
GGG

GGG
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   329330.........340.........350.........360.........370.........380...... ...390.........400.......
 
   329330.... .....340.........350.........360......... 370.........380.........
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Query Sequence  RPLNID. . . . . . . . . . . . . . . DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG. . . CPRSKLEKGVAGLINAIRAV
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Template Sequence  VPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPH. . GTRGNFFRVVVANSALTCADMDFLLNELERLGQDL
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GGGTT
TTSTTTTS
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   417..420.........430.........440.........450........ .460.........470.........480.........490...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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