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Job DescriptionP23256
Confidence99.96%DateThu Jan 5 11:39:19 GMT 2012
Rank136Aligned Residues340
% Identity10%Templatec2hdyA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:selenocysteine lyase; PDBTitle: structure of human selenocysteine lyase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50........ .60...... ...70.........80.........90.........100.......
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Query Sequence  ATAPCIIEALNQRLMHGV. . . . FGYSRWKN. DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQW. . . . . . . .
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Template Sequence  PLEPEVIQAMTKAMWEAWGNPSSPYSAGRKAKDIINAARESLAKMIG. . GKPQDIIFTSGGTESNNLVIHSVVKHFHANQ
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S
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GGGS
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   41........50.........60.........70.........80....... ..90.........100.........110........
 
   108.110.........120.........130. ........140.........150.........160.........170.........180.....
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Query Sequence  SETGEGVVIHTPAYDAFYKAIEGN. . QRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELE
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Template Sequence  TGAKPHFITSSVEHDSIRLPLEHLVEEQVAAVTFVPVSKVSGQTEVDDILAAVRPTTRLVTIMLANNETGIVMP. . . . VP
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   119120.........130.........140.........150.........160.........170.........180.........190.. ..
 
   186...190.........200.........210.. .......220.........230.........240.........250..... .
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Query Sequence  IMADLCERHGVRVISDEIHMDMVWGEQ. . . . PHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDA. . . . . Y
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Template Sequence  EISQRIKALNQERVAAGLPPILVHTDAAQALGKQRVDVEDLGVDFLTIVGHKFY. . . GPRIGALYIRGLGEFTPLYPMLF
Template Known Secondary structure  TT




TTTTTTS




SGGGTT...S
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   208.210.........220.........230.........240.........250.........260. ........270.........280....
 
   257..260.........270.........280.........290.........300.........310..... ....320.........330.
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Query Sequence  LSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNW. . . . . QIPQSTYLAWLDLRPL
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Template Sequence  GGGQERNFRPGTENTPMIAGLGKAAELVTQNCEAYEAHMRDVRDYLEERLEAEFGQKRIHLNSQFPGTQRLPNTCNFSIR
Template Known Secondary structure  SS
GGGGTS
S



GGGSS

TT

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   285....290.........300.........310.........320.........330.........340.........350.........360....
 
   332.......340.........350.........360 ......... 370.........380.........390
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Query Sequence  NIDDNALQKALIEQEKVAIMPGYTYGEEG. . . . . . . . . . . . . . . . . . RGFVRLNAG. . CPRSKLEKGVAGLINAIRAVR
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Template Sequence  GPRLQGHVVLA. QCRVLMASVGAACHSDHGDQPSPVLLSYGVPFDVARNALRLSVGRSTTRAEVDLVVQDLKQAVAQLE
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   365....370..... ....380.........390.........400.........410.........420.........430.........440..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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