Job Description P23256 Confidence 99.98% Date Thu Jan 5 11:39:19 GMT 2012 Rank 100 Aligned Residues 351 % Identity 13% Template c2eh6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase from aquifex2 aeolicus vf5 Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.						.
Query SS confidence																																					.	.						.
Query Sequence		F	D	F	S	K	V	V	D	R	H	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	.	.	D	M	D	F	A	.	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	D	E	F	L	A	A	I	A	H	W	F	S
Query Conservation																																					.	.						.
Alig confidence											.										.	.	.	.	.												.	.						.																		.
Template Conservation											.										.	.	.	.	.																																					.
Template Sequence		A	R	L	P	V	K	F	V	R	.	G	K	G	V	Y	L	Y	D	E	.	.	.	.	.	E	G	K	E	Y	L	D	F	V	S	G	I	G	V	N	S	L	G	H	A	Y	P	K	L	T	E	A	L	K	E	Q	V	E	K	L	L	.	H	V	S	N	L	Y	E	N	P	W	Q	E	E	L	A	H	K	L	V
Template Known Secondary structure					S						.			B	T					T	.	.	.	.	.	T							S	S					T		T	T		B	S																S	.				T	T	S
Template Predicted Secondary structure											.										.	.	.	.	.																																					.
Template SS confidence
		8	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.						.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.								.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.																		.																										.
Query SS confidence																															.	.	.	.	.	.	.																		.																										.
Query Sequence		T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	.	.	.	.	.	.	.	S	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	.	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	.
Query Conservation																															.	.	.	.	.	.	.																		.																										.
Alig confidence								.	.	.																					.	.	.	.	.	.	.																		.																										.
Template Conservation								.	.	.
Template Sequence		K	H	F	W	T	E	.	.	.	G	K	V	F	F	A	N	S	G	T	E	S	V	E	A	A	I	K	L	A	R	K	Y	W	R	D	K	G	K	N	K	W	K	F	I	S	F	E	N	S	F	H	G	R	T	Y	G	S	L	S	A	T	G	Q	P	K	F	H	K	G	F	E	P	L	V	P	G	F	S	Y	A
Template Known Secondary structure			T	S	S	S		.	.	.							S	S																			T	T										B	T					S	S								B		G	G	G	T	T	T	T		S			S	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		81	.	.	.	.	.				.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
					150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A
Query Conservation		.	.	.
Alig confidence		.	.	.																																																																				.	.	.
Template Conservation																																																																								.	.	.
Template Sequence		K	L	N	D	I	D	S	V	Y	K	L	L	D	E	E	T	A	G	I	I	I	E	V	I	Q	G	E	G	G	V	N	E	A	S	E	D	F	L	S	K	L	Q	E	I	C	K	E	K	D	V	L	L	I	I	D	E	V	Q	T	G	I	G	R	T	G	E	F	Y	A	Y	.	.	.	Q	H	F	N	L	K	P
Template Known Secondary structure			T	T							T	T			T	T								S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T	S	S	S	S	G	G	.	.	.	G	G	G	T
Template Predicted Secondary structure																																																																								.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.				.	.	230	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M
Query Conservation
Alig confidence												.																				.	.	.
Template Conservation												.																				.	.	.
Template Sequence		D	V	I	A	L	A	K	G	L	G	.	G	G	V	P	I	G	A	I	L	A	R	E	E	V	A	Q	S	F	T	.	.	.	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	R	A	G	T	V	V	V	D	E	V	E	K	L	L	P	H	V	R	E	V	G	N	Y	F	K	E	K	L	K	E	L	G
Template Known Secondary structure		S						G	G	G	G	.	T	T	S													T	T			.	.	.	T	T	S				S	S	T	T																																				T	T
Template Predicted Secondary structure												.																				.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R	L	N	A	G	.	.	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N
Query Conservation																																																																	.	.
Alig confidence									.	.	.	.	.	.	.									.	.	.															.									.	.	.	.	.	.										.	.
Template Conservation									.	.	.	.	.	.	.									.	.	.															.									.	.	.	.	.	.
Template Sequence		K	G	K	V	K	G	R	.	.	.	.	.	.	.	G	L	M	L	G	L	E	L	.	.	.	E	R	E	C	K	D	Y	V	L	K	A	L	E	K	.	G	L	L	I	N	C	T	A	.	.	.	.	.	.	G	K	V	L	R	F	L	P	P	L	I	I	Q	K	E	H	I	D	R	A	I	S	V	L	R	E
Template Known Secondary structure		S	S						.	.	.	.	.	.	.	T	T							.	.	.	S	S												T	.	T							T	.	.	.	.	.	.	T	T								T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.									.	.	.															.									.	.	.	.	.	.
Template SS confidence
		311	.	.	.	.	.	.								.	.	320	.	.	.	.	.				.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.							.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		385	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		374	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions