Job Description P23256 Confidence 99.94% Date Thu Jan 5 11:39:19 GMT 2012 Rank 153 Aligned Residues 359 % Identity 13% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																						.	.						.																										.
Query SS confidence																																						.	.						.																										.
Query Sequence		M	F	D	F	S	K	V	V	D	R	H	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	.	.	D	M	D	F	A	.	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W
Query Conservation																																						.	.						.																										.
Alig confidence											.											.	.	.	.	.												.	.						.																										.
Template Conservation											.											.	.	.	.	.
Template Sequence		V	G	G	T	P	P	F	L	V	.	R	G	E	G	A	Y	V	W	D	A	.	.	.	.	.	D	G	N	R	Y	L	D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	P	K	V	L	A	R	V	R	E	T	L	E	R	G	L	T	F	G	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A
Template Known Secondary structure		T		S							.				B	T					T	.	.	.	.	.	T							S	S	G	G	G	T	T		T	T		B	T														T		S			S	S
Template Predicted Secondary structure											.											.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																																									.	.	.	.	.
Query SS confidence																																			.	.																																									.	.	.	.	.
Query Sequence		F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	E	.	.	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	.	.	.	.	.
Query Conservation																																			.	.																																									.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.																										.	.																																									.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		Y	.	.	.	.	.	.	.	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	T	G	R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S	G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L
Template Known Secondary structure			.	.	.	.	.	.	.	T	T								S	S																									T	T							G	G	G	S					S	S	S			B				S	S	T	T							T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		105								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
									150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure		.	.	.	.	.	.	.												.	.
Query SS confidence		.	.	.	.	.	.	.												.	.
Query Sequence		.	.	.	.	.	.	.	D	M	G	K	L	E	A	V	L	A	K	.	.	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V
Query Conservation		.	.	.	.	.	.	.												.	.
Alig confidence		.	.	.	.	.	.	.												.	.
Template Conservation
Template Sequence		T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G	E	E	I	A	A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L	L	I	A	D	E	V	M	T	G	F	R	L	A	F	G	G	A	T	E	L	L	G	L
Template Known Secondary structure							T	T													G	G	G								S	S	B		T	T	S		B													G	G	G	G	T								T	T	T	T	T	T	S	S	T	T							T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	.	.	.	A	P	W	L	D	A	L	R	I	Y	L	K	D
Query Conservation																																																																		.	.	.
Alig confidence					.	.	.	.										.																																																.	.	.
Template Conservation					.	.	.	.										.
Template Sequence		K	P	D	.	.	.	.	L	V	T	L	G	K	I	L	G	.	G	G	L	P	A	A	A	Y	A	G	R	R	E	I	M	E	K	V	A	P	L	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L	A	T	L	E	L	L	E	E	N	P	G	Y	Y	A	Y	L	E	D	L	G	A	R
Template Known Secondary structure				S	.	.	.	.						G	G	G	G	.	T	T	S	S												T	T	B	T	T	T	S	S	B					T	T		S																			T
Template Predicted Secondary structure					.	.	.	.										.
Template SS confidence
		258	.	260					.	.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.													.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	G	R	G	F	V	R
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.															.	.	.	.	.	.	.	.	.	.	.	.												.								.	.	.	.	.	.
Template Conservation																							.	.																																						.								.	.	.	.	.	.
Template Sequence		L	E	A	G	L	K	E	V	L	K	E	K	G	L	P	H	T	V	N	R	V	.	.	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R	.	G	I	Y	W	P	P	S	.	.	.	.	.	.	N	F	E	A	A	F
Template Known Secondary structure													T	T									.	.	T	T						S	S	S	S				S					T	T	S														T	T	.	T					S	S	.	.	.	.	.	.	S	S	S
Template Predicted Secondary structure																							.	.																																						.								.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.			.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390		.	.	.	.	.	.	.							.	.	400	.	.	.
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L	R	K	A	L
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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