Job Description P23256 Confidence 99.91% Date Thu Jan 5 11:39:19 GMT 2012 Rank 185 Aligned Residues 369 % Identity 10% Template c2cjdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:l-lysine-epsilon aminotransferase; PDBTitle: lysine aminotransferase from m. tuberculosis in external2 aldimine form Resolution 2.00 Å

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		3	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.
Predicted Secondary structure									.																												.	.						.																.	.	.											.
Query SS confidence									.																												.	.						.																.	.	.											.
Query Sequence		D	F	S	K	V	V	D	.	R	H	G	T	W	C	T	Q	W	D	Y	V	A	D	R	F	G	T	A	D	L	L	P	F	T	I	S	.	.	D	M	D	F	A	.	T	A	P	C	I	I	E	A	L	N	Q	R	L	M	H	.	.	.	G	V	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A
Query Conservation									.																												.	.						.																.	.	.											.
Alig confidence									.												.	.	.	.													.	.						.																.	.	.											.
Template Conservation																					.	.	.	.
Template Sequence		G	L	D	I	V	L	D	L	T	R	S	G	G	S	Y	L	V	D	A	.	.	.	.	I	T	G	R	R	Y	L	D	M	F	T	F	V	A	S	S	A	L	G	M	N	P	P	A	L	V	D	D	R	E	F	H	A	E	L	M	Q	A	A	L	N	K	P	S	N	S	D	V	Y	S	V	A	M	A	R	F	V
Template Known Secondary structure		S		S	S		B		T	T	T		B	B	T				B	T	.	.	.	.	T	T							S	S					T		S	S		B	S						T													T					T	T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.															.	110	.	.	.	.	.	.	.	.	.	120	.	.	.															.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	G	E	G	V	V	I	H	T	P	A	Y	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	K
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		E	T	F	A	R	V	L	G	D	P	.	A	L	P	H	L	F	F	V	E	G	G	A	L	A	V	E	N	A	L	K	A	A	F	D	W	K	S	R	H	N	Q	A	H	G	I	D	P	A	L	G	T	Q	V	L	H	L	R	G	A	F	H	G	R	S	G	Y	T	L	S	L	T	N	T	K	P	T	I	T	A
Template Known Secondary structure											T	.	T								S	S																							T	T	S		T	T									T	T					S	S	T	T	G	G	G	T			S						T
Template Predicted Secondary structure												.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.								.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.												.	.	.
Query SS confidence																								.	.	.	.	.	.	.												.	.	.
Query Sequence		A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	.	.	.	.	.	.	.	C	D	M	G	K	L	E	A	V	L	A	.	.	.	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R	H	G	V
Query Conservation																								.	.	.	.	.	.	.												.	.	.
Alig confidence																								.	.	.	.	.	.	.												.	.	.
Template Conservation
Template Sequence		R	F	P	K	F	D	W	P	R	I	D	A	P	Y	M	R	P	G	L	D	E	P	A	M	A	A	L	E	A	E	A	L	R	Q	A	R	A	A	F	E	T	R	P	H	D	I	A	C	F	V	A	E	P	I	Q	G	E	G	G	D	R	H	F	R	P	E	F	F	A	A	M	R	E	L	C	D	E	F	D	A
Template Known Secondary structure		T	S															T	T																								S	T	T	T								S			S	T	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A
Query Conservation
Alig confidence																																.	.	.																	.
Template Conservation																																.	.	.																	.
Template Sequence		L	L	I	F	D	E	V	Q	T	G	C	G	L	T	G	T	A	W	A	Y	Q	Q	L	D	V	A	P	D	I	V	.	.	.	A	F	G	K	K	T	Q	V	C	G	V	M	A	G	R	R	.	V	D	E	V	A	D	N	V	F	A	V	P	S	R	L	N	S	T	W	G	G	N	L	T	D	M	V	R	A	R
Template Known Secondary structure								T	T	T	T	T	T	T	T	S	S	S	S	T					T				S			.	.	.				G	G	G	S	S							G	G	.	G	G	G	S	T	T		T	T	T	S	T	T	S	S			S	S	S	S
Template Predicted Secondary structure																																.	.	.																	.
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.				.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	L	A	W	L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y
Query Conservation
Alig confidence																																													.											.															.								.	.	.
Template Conservation																																													.											.															.								.	.	.
Template Sequence		R	I	L	E	V	I	E	A	E	G	L	F	E	R	A	V	Q	H	G	K	Y	L	R	A	R	L	D	E	L	A	A	D	F	P	A	V	V	L	D	P	R	G	R	.	G	L	M	C	A	F	S	L	P	T	.	T	A	D	R	D	E	L	I	R	Q	L	W	Q	R	.	A	V	I	V	L	P	A	.	.	.
Template Known Secondary structure											T																							S	T	T	T	S							.	T	T							S	S	.														T	.	T							.	.	.
Template Predicted Secondary structure																																													.											.															.								.	.	.
Template SS confidence
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.		.	.	.	.	390	.	.	.	.	.		.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.
		357	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	E	E	G	R	G	F	V	R	L	.	.	N	A	G	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A	V
Query Conservation												.	.
Alig confidence		.	.	.								.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	G	A	D	T	V	R	F	R	P	P	L	T	V	S	T	A	E	I	D	A	A	I	A	A	V	R	S	A	L	P	V	V
Template Known Secondary structure		.	.	.	T	T	T								T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.