Job Description P23256 Confidence 99.96% Date Thu Jan 5 11:39:19 GMT 2012 Rank 132 Aligned Residues 334 % Identity 11% Template c2c7tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glutamine-2-deoxy-scyllo-inosose PDBTitle: crystal structure of the plp-bound form of btrr,2 a dual functional aminotransferase involved in butirosin3 biosynthesis. Resolution 2.1 Å

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		38	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.
Predicted Secondary structure								.																.									.																																										.
Query SS confidence								.																.									.																																										.
Query Sequence		M	D	F	A	T	A	.	P	C	I	I	E	A	L	N	Q	R	L	M	H	G	V	.	F	G	Y	S	R	W	K	N	.	D	E	F	L	A	A	I	A	H	W	F	S	T	Q	H	Y	T	A	I	D	S	Q	T	V	V	Y	G	P	S	V	I	Y	M	V	S	E	L	I	R	Q	W	.	S	E	T	G	E	G
Query Conservation								.																.									.																																										.
Alig confidence								.																.									.																		.	.	.	.																					.
Template Conservation																																																			.	.	.	.
Template Sequence		P	E	W	P	Q	H	S	D	R	T	R	R	K	I	E	E	V	F	Q	S	N	R	W	A	I	S	G	Y	W	T	G	E	E	S	M	E	R	K	F	A	K	A	F	A	D	F	N	G	V	.	.	.	.	P	Y	C	V	P	T	T	S	G	S	T	A	L	M	L	A	L	E	A	L	G	I	G	E	G	D	E
Template Known Secondary structure				S	S																	T			S	T	T	S	B			S	S																T		.	.	.	.	S						S													T	T			T	T
Template Predicted Secondary structure																																																			.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	H	T	P	A	Y	D	A	F	Y	K	A	I	E	G	N	Q	R	T	V	M	P	V	A	L	E	K	Q	A	D	G	W	F	C	D	M	G	K	L	E	A	V	L	A	K	P	E	C	K	I	M	L	L	C	S	P	Q	N	P	T	G	K	V	W	T	C	D	E	L	E	I	M	A	D	L	C	E	R
Query Conservation
Alig confidence																																	.	.																														.	.	.	.	.	.	.
Template Conservation																																	.	.																														.	.	.	.	.	.	.
Template Sequence		V	I	V	P	S	L	T	W	I	A	T	A	T	A	V	L	N	V	N	A	L	P	V	F	V	D	V	E	A	D	T	.	.	Y	C	I	D	P	Q	L	I	K	S	A	I	T	D	K	T	K	A	I	I	P	V	H	L	F	G	S	M	A	.	.	.	.	.	.	.	N	M	D	E	I	N	E	I	A	Q	E
Template Known Secondary structure						S	S	S		T									T	T								B		T	T	T	.	.		S	B											T	T							B			T	T				.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.																														.	.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	G	V	R	V	I	S	D	E	I	H	M	D	M	V	W	G	E	Q	P	H	I	P	W	S	N	V	A	R	G	D	W	A	L	L	T	S	G	S	K	S	F	N	I	P	A	L	T	G	A	Y	G	I	I	E	N	S	S	S	R	D	A	Y	L	S	A	L	K	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		H	N	L	F	V	I	E	D	C	A	Q	S	H	G	S	V	W	N	N	Q	R	.	.	.	.	.	A	G	T	I	G	D	I	G	A	F	S	C	Q	Q	G	K	V	L	T	A	G	E	G	G	I	I	V	T	K	N	P	R	L	F	E	L	I	Q	Q	L	R	A	D	S	R	V	Y	C	D	D	S	S	E	L
Template Known Secondary structure			T								T	T		T	T				T	T			.	.	.	.	.	T	T	S	S	S	S								T	T	S	S	S		S	S	S							S													B	T	T					S		T	T	S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
														262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.					.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	G	R	D	G	L	S	S	P	S	V	L	A	L	T	A	H	I	A	A	Y	Q	Q	G	A	P	W	L	D	A	L	R	I	Y	L	K	D	N	L	T	Y	I	A	D	K	M	N	A	A	F	P	E	L	N	W	Q	I	P	Q	S	T	Y	.	.	.	.	L	A	W
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																																																														.	.	.	.
Template Conservation
Template Sequence		M	H	G	D	M	Q	L	V	K	K	G	D	I	Q	G	S	N	Y	C	L	S	E	F	Q	S	A	I	L	L	D	Q	L	Q	E	L	D	D	K	N	A	I	R	E	K	N	A	M	F	L	N	D	A	L	S	K	I	D	G	I	K	V	M	K	R	P	P	Q	V	S	R	Q	T	Y	Y	G	Y	V	F	R	F
Template Known Secondary structure			T	T		B	S						S	S				B																T	T																				T	T	S	T	T								T	T							S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.																																						360	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	L	R	P	L	N	I	D	D	N	A	L	Q	K	A	L	I	E	Q	E	K	V	A	I	M	P	G	Y	T	Y	G	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	G	F	V	R	L	N	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	P	V	K	F	G	G	L	N	A	D	Q	F	C	E	I	L	R	E	K	L	N	M	G	T	F	Y	L	H	P	P	Y	L	P	V	H	K	N	P	L	F	C	P	W	T	K	N	R	Y	L	K	S	V	R	K	T	E	A	Y	W	R	G	L	H	Y	P	V	S	E	R	A	S	G	Q	S	I	V	I	H	H
Template Known Secondary structure			G	G	G	T	T	T															T			T	T	T								G	G	G		T	T			G	G	G		T	T	S													T										T	T	S						G
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		369				370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		G	.	.	.	C	P	R	S	K	L	E	K	G	V	A	G	L	I	N	A	I	R	A	V
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		A	I	L	L	A	E	P	S	H	L	S	L	L	V	D	A	V	A	E	L	A	R	K	F
Template Known Secondary structure		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions