Return to main results Retrieve Phyre Job Id

Job DescriptionP23256
Confidence25.94%DateThu Jan 5 11:39:19 GMT 2012
Rank257Aligned Residues107
% Identity9%Templatec1xp8A_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s"
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  GPSVIYMVSELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQ
Query Conservation 
 
   

      
   

 


  
 
          
                     
                 
Alig confidence 

















































.




























Template Conservation 
 


 
 
         
  




 
          

 
   
    .    
  
             






 
Template Sequence  SGGKTTLALAIVAQAQKAGGTCAFIDAEHALDPVYARALGVNTDELLVSQ. PDNGEQALEIMELLVRSGAIDVVVVDSVA
Template Known Secondary structure  TSSTT

SS



TT

GGG

.
SSTTT

S
TT
Template Predicted Secondary structure 

















.









Template SS confidence 















































































   81........90.........100.........110.........120.........130 .........140.........150.........
 
   173......180. ........190.........200
Predicted Secondary structure 







........


Query SS confidence 








. . . . . . . .


















Query Sequence  NPTGKVWTC. . . . . . . . DELEIMADLCERHGVRVIS
Query Conservation   
       ........  
  
   
      

 
Alig confidence 








........


















Template Conservation 

    
     

     
  
   
      

 
Template Sequence  ALTPRAEIPGLQARLMSQALRKLTAILSKTGTAAIF
Template Known Secondary structure  T


STT


TTT

Template Predicted Secondary structure 











Template SS confidence 



































   160.........170.........180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions