Email l.a.kelley@imperial.ac.uk Description P10026 Date Thu Jan 5 11:31:57 GMT 2012 Unique Job ID a527fa44fb29cb5d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 c3on0D_ 100.0 39 PDB header:dna binding protein/dna Chain: D: PDB Molecule:protein tram; PDBTitle: crystal structure of the ped208 tram-sbma complex 2 d2g7oa1 99.9 100 Fold:TraM-like Superfamily:TraM-like Family:TraM-like 3 d1dp3a_ 99.9 64 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:DNA-binding domain (fragment?) of the TraM protein 4 c3omyB_ 99.9 48 PDB header:dna binding protein Chain: B: PDB Molecule:protein tram; PDBTitle: crystal structure of the ped208 tram n-terminal domain 5 d1tlha_ 42.5 15 Fold:Anti-sigma factor AsiA Superfamily:Anti-sigma factor AsiA Family:Anti-sigma factor AsiA 6 c2qwtA_ 23.8 20 PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator, tetr family; PDBTitle: crystal structure of the tetr transcription regulatory2 protein from mycobacterium vanbaalenii 7 c2jvdA_ 15.1 28 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: solution nmr structure of the folded n-terminal fragment of2 upf0291 protein ynzc from bacillus subtilis. northeast3 structural genomics target sr384-1-46 8 c3bhpA_ 14.7 27 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0291 protein ynzc; PDBTitle: crystal structure of upf0291 protein ynzc from bacillus2 subtilis at resolution 2.0 a. northeast structural3 genomics consortium target sr384 9 c2l53B_ 14.4 36 PDB header:ca-binding protein/proton transport Chain: B: PDB Molecule:voltage-gated sodium channel type v alpha isoform b PDBTitle: solution nmr structure of apo-calmodulin in complex with the iq motif2 of human cardiac sodium channel nav1.5 10 d1oysa2 13.2 25 Fold:Ribonuclease PH domain 2-like Superfamily:Ribonuclease PH domain 2-like Family:Ribonuclease PH domain 2-like 11 d1x2la1 11.5 18 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:CUT domain 12 c3bpqC_ 11.1 32 PDB header:toxin Chain: C: PDB Molecule:antitoxin relb3; PDBTitle: crystal structure of relb-rele antitoxin-toxin complex from2 methanococcus jannaschii 13 c2r17C_ 10.8 14 PDB header:protein transport Chain: C: PDB Molecule:vacuolar protein sorting-associated protein 35; PDBTitle: functional architecture of the retromer cargo-recognition complex 14 c3r9lA_ 10.4 13 PDB header:transferase Chain: A: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: crystal structure of nucleoside diphosphate kinase from giardia2 lamblia featuring a disordered dinucleotide binding site 15 d2v7qi1 10.2 23 Fold:Non-globular all-alpha subunits of globular proteins Superfamily:Epsilon subunit of mitochondrial F1F0-ATP synthase Family:Epsilon subunit of mitochondrial F1F0-ATP synthase 16 c2jdqB_ 9.9 25 PDB header:protein transport Chain: B: PDB Molecule:importin alpha-1 subunit; PDBTitle: c-terminal domain of influenza a virus polymerase pb22 subunit in complex with human importin alpha5 17 c2cp8A_ 8.4 29 PDB header:protein binding Chain: A: PDB Molecule:next to brca1 gene 1 protein; PDBTitle: solution structure of the rsgi ruh-046, a uba domain from2 human next to brca1 gene 1 protein (kiaa0049 protein)3 r923h variant 18 d1zkda1 8.4 28 Fold:S-adenosyl-L-methionine-dependent methyltransferases Superfamily:S-adenosyl-L-methionine-dependent methyltransferases Family:RPA4359-like 19 d1l7da2 7.3 16 Fold:Flavodoxin-like Superfamily:Formate/glycerate dehydrogenase catalytic domain-like Family:L-alanine dehydrogenase-like 20 c2kxwB_ 7.2 36 PDB header:calcium-binding protein/metal transport Chain: B: PDB Molecule:sodium channel protein type 2 subunit alpha; PDBTitle: structure of the c-domain fragment of apo calmodulin bound to the iq2 motif of nav1.2 21 c3mtuE_ not modelled 7.1 28 PDB header:contractile protein Chain: E: PDB Molecule:head morphogenesis protein, tropomyosin alpha-1 chain; PDBTitle: structure of the tropomyosin overlap complex from chicken smooth2 muscle 22 d1f7ca_ not modelled 6.9 14 Fold:GTPase activation domain, GAP Superfamily:GTPase activation domain, GAP Family:BCR-homology GTPase activation domain (BH-domain) 23 c1f7cA_ not modelled 6.9 14 PDB header:signaling protein Chain: A: PDB Molecule:rhogap protein; PDBTitle: crystal structure of the bh domain from graf, the gtpase2 regulator associated with focal adhesion kinase 24 c3izcR_ not modelled 6.4 24 PDB header:ribosome Chain: R: PDB Molecule:60s ribosomal protein rpl18 (l18e); PDBTitle: localization of the large subunit ribosomal proteins into a 6.1 a2 cryo-em map of saccharomyces cerevisiae translating 80s ribosome 25 d1nhkl_ not modelled 6.2 25 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 26 c3pk1A_ not modelled 6.2 20 PDB header:apoptosis/apoptosis regulator Chain: A: PDB Molecule:induced myeloid leukemia cell differentiation protein mcl- PDBTitle: crystal structure of mcl-1 in complex with the baxbh3 domain 27 d1kx5b_ not modelled 6.0 21 Fold:Histone-fold Superfamily:Histone-fold Family:Nucleosome core histones 28 d2o4aa1 not modelled 6.0 23 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:CUT domain 29 d1xiqa_ not modelled 6.0 13 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 30 c2hurF_ not modelled 5.9 27 PDB header:signaling protein,transferase Chain: F: PDB Molecule:nucleoside diphosphate kinase; PDBTitle: escherichia coli nucleoside diphosphate kinase 31 c2imuA_ not modelled 5.8 22 PDB header:viral protein Chain: A: PDB Molecule:structural polyprotein (pp) p1; PDBTitle: nmr structure of pep46 from the infectious bursal disease2 virus (ibdv) in dodecylphosphocholin (dpc). 32 d1ehwa_ not modelled 5.7 20 Fold:Ferredoxin-like Superfamily:Nucleoside diphosphate kinase, NDK Family:Nucleoside diphosphate kinase, NDK 33 c3knyA_ not modelled 5.5 39 PDB header:unknown function Chain: A: PDB Molecule:hypothetical protein bt_3535; PDBTitle: crystal structure of a two domain protein with unknown function2 (bt_3535) from bacteroides thetaiotaomicron vpi-5482 at 2.60 a3 resolution 34 c2o01J_ not modelled 5.4 63 PDB header:photosynthesis Chain: J: PDB Molecule:photosystem i reaction center subunit ix; PDBTitle: the structure of a plant photosystem i supercomplex at 3.42 angstrom resolution