Job Description P10026 Confidence 100.00% Date Thu Jan 5 11:31:57 GMT 2012 Rank 1 Aligned Residues 107 % Identity 39% Template c3on0D_ PDB info PDB header:dna binding protein/dna Chain: D: PDB Molecule:protein tram; PDBTitle: crystal structure of the ped208 tram-sbma complex Resolution 2.87 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	V	N	L	Y	I	S	N	D	A	Y	E	K	I	N	A	I	I	E	K	R	R	Q	E	G	A	R	E	K	D	V	S	F	S	A	T	A	S	M	L	L	E	L	G	L	R	V	H	E	A	Q	M	E	R	K	E	S	A	F	N	Q	T	E	F	N	K	L	L	L	E	C	V	V	K	T	Q	S	S	V
Query Conservation
Alig confidence																														.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.																			.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	K	I	Q	T	Y	V	N	N	N	V	Y	E	Q	I	T	D	L	V	T	I	R	K	Q	E	G	I	E	.	.	E	A	S	L	S	N	V	S	S	M	L	L	E	L	G	L	R	V	.	.	.	.	.	.	.	.	.	.	.	F	N	Q	M	E	Y	N	K	L	M	L	E	N	V	S	R	V	R	A	M	C
Template Known Secondary structure																									T	T	T		T	.	.	T																		.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																														.	.																			.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.												.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	I	L	G	I	E	S	L	S	P	H	V	S	G	N	S	K	F	E	Y	A	N	M	V	E	D	I	R	E	K	V	S	S	E	M	E	R	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	I	L	K	M	S	V	L	N	Q	E	S	I	A	S	G	N	F	D	Y	A	V	I	K	P	A	I	D	K	F	A	R	E	Q	V	S	I	F	F
Template Known Secondary structure											S							T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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