Return to main results Retrieve Phyre Job Id

Job DescriptionP33029
Confidence4.53%DateThu Jan 5 11:51:05 GMT 2012
Rank92Aligned Residues35
% Identity17%Templatec3t6gB_
PDB info PDB header:signaling protein, cell adhesionChain: B: PDB Molecule:breast cancer anti-estrogen resistance protein 1; PDBTitle: structure of the complex between nsp3 (shep1) and p130cas
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   188.190.........200.........210.........220... ......
Predicted Secondary structure 









.....





Query SS confidence 



































. . . . .





Query Sequence  IPDNGHVVKNAVLGMAEKRSPELAGWIKEHVSFPGT. . . . . MVDRIV
Query Conservation 
  

  

  
   
         

   
 



.....





Alig confidence 




















.......







.....





Template Conservation 
   
  

  

  
 


 .......


 


  






 
 
Template Sequence  VTHYSNLLCDLLRGIVATTKA. . . . . . . AALQYPSPSAAQDMVERVK
Template Known Secondary structure  .......T
S
Template Predicted Secondary structure  .......


Template SS confidence 














































   812.......820.........830.. .......840.........850.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions