Job Description P33029 Confidence 5.38% Date Thu Jan 5 11:51:05 GMT 2012 Rank 81 Aligned Residues 61 % Identity 26% Template c3ktwA_ PDB info PDB header:rna/rna binding protein Chain: A: PDB Molecule:signal recognition particle 19 kda protein; PDBTitle: crystal structure of the srp19/s-domain srp rna complex of sulfolobus2 solfataricus Resolution 3.20 Å

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		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	R	I	V	P	A	A	T	D	E	S	L	V	E	I	S	Q	H	L	G	V	N	D	P	C	A	I	S	C	E	P	F	I	Q	W	V	V	E	D	N	F	V	A	G	R	P	A	W	E	V	A	G	V	Q	M	V	N	D	V	L	P	W	E	E	M	K	L	R	M	L	N	G	S	H	S	F	L
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.
Template Sequence		L	A	R	I	P	Y	K	I	K	T	E	E	L	V	S	T	L	R	E	L	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	P	I	V	I	E	N	K	K	Y	P	R	D	.	R	K	I	N	F	L	I	A	V	K	.	.	.	.	K	V	K	S	K	N	Y	T	L	K	I	I	H	N	A	L
Template Known Secondary structure		S	S			S	S														T	T			.	.	.	.	.	.	.	.	.	.	.	.						S				S	S		.	T	T									.	.	.	.		S	S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.													.											.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.													.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions