Return to main results Retrieve Phyre Job Id

Job DescriptionP34749
Confidence7.21%DateThu Jan 5 11:53:09 GMT 2012
Rank25Aligned Residues47
% Identity17%Templated1ueba3
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   273......280.........290.........300.........310.........
Predicted Secondary structure 









Query SS confidence 














































Query Sequence  ASIKQGSEIPYQVSSGESGATSVEFKEAVLGMEVTPTVLQKGRIRLK
Query Conservation 
 
  
                      
  
 
 
 
  
  
 
 
Alig confidence 














































Template Conservation 
 
 
 

 
 





    


 



  
 

 

  

 
 

Template Sequence  VELKVVDTPPGVRGDTVSGGSKPATLETGAVVQVPLFVEPGEVIKVD
Template Known Secondary structure 

SSS

SSSS
STTS
TT

TT
Template Predicted Secondary structure 























Template SS confidence 














































   128.130.........140.........150.........160.........170....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions