Job Description P34749 Confidence 99.80% Date Thu Jan 5 11:53:09 GMT 2012 Rank 3 Aligned Residues 149 % Identity 12% Template c3ossD_ PDB info PDB header:protein transport Chain: D: PDB Molecule:type 2 secretion system, secretin gspd; PDBTitle: the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system Resolution 2.63 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.
Query SS confidence																																												.	.	.	.
Query Sequence		K	V	T	L	M	V	D	D	V	P	V	A	Q	V	L	Q	A	L	A	E	Q	E	K	L	N	L	V	V	S	P	D	V	S	G	T	V	S	L	H	L	T	D	.	.	.	.	V	P	W	K	Q	A	L	Q	T	V	V	K	S	A	G	L	I	T	R	Q	E	G	N	I	L	S	V	H	S	I	A	W	Q	N
Query Conservation																																												.	.	.	.
Alig confidence																																												.	.	.	.
Template Conservation
Template Sequence		T	F	T	A	N	F	K	D	T	D	L	K	S	F	I	E	T	V	G	A	N	L	N	K	T	I	I	M	G	P	G	V	Q	G	K	V	S	I	R	T	M	T	P	L	N	E	R	Q	Y	Y	Q	L	F	L	N	L	L	E	A	Q	G	Y	A	V	V	P	M	Y	I	D	T	N	N	D	G	Y	I	E	G	D
Template Known Secondary structure																								T							S											S	S																			T										T	T	S	S	S				G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																															.	.
Query SS confidence																																															.	.
Query Sequence		N	N	I	A	R	Q	E	A	E	Q	A	R	A	Q	A	N	L	P	L	E	N	R	S	I	T	L	Q	Y	A	D	A	G	E	L	A	K	A	G	E	K	L	L	S	A	K	.	.	G	S	M	T	V	D	K	R	T	N	R	L	L	L	R	D	N	K	T	A	L	S	A	L	E	Q	W	V	A	Q	M	D	L
Query Conservation																																															.	.
Alig confidence								.	.	.	.	.																																			.	.
Template Conservation								.	.	.	.	.
Template Sequence		E	L	V	L	K	V	.	.	.	.	.	V	K	S	A	G	D	E	M	V	T	K	V	V	P	V	R	N	V	S	V	R	E	L	A	P	I	L	R	Q	M	I	D	S	A	G	S	G	N	V	V	N	Y	D	P	S	N	V	I	M	L	T	G	R	A	S	V	V	E	R	L	T	E	V	I	Q	R	V	D	H
Template Known Secondary structure		G						.	.	.	.	.					T	T										S	S	S		G	G	G	G													T	T							T	T	T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		712	.	.	.	.	.						.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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