Job Description P34749 Confidence 99.91% Date Thu Jan 5 11:53:09 GMT 2012 Rank 1 Aligned Residues 140 % Identity 16% Template c3gr5A_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:escc; PDBTitle: periplasmic domain of the outer membrane secretin escc from2 enteropathogenic e.coli (epec) Resolution 2.05 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Q	K	V	T	L	M	V	D	D	V	P	V	A	Q	V	L	Q	A	L	A	E	Q	E	K	L	N	L	V	V	S	P	D	V	S	G	T	V	S	L	H	L	T	D	V	P	W	K	Q	A	L	Q	T	V	V	K	S	A	G	L	I	T	R	Q	E	G	N	I	L	S	V	H	S	I	A	W	Q	N	N	N
Query Conservation
Alig confidence																																																																											.	.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.	.
Template Sequence		K	N	E	Y	F	I	I	T	K	S	S	P	V	R	A	I	L	N	D	F	A	A	N	Y	S	I	P	V	F	I	S	S	S	V	N	D	D	F	S	G	E	I	K	N	E	K	P	V	K	V	L	E	K	L	S	K	L	Y	H	L	T	W	Y	Y	D	E	N	I	L	Y	I	Y	K	.	.	.	.	.	.	.
Template Known Secondary structure		S																							T	T							T	T																										T							S	S							.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		I	A	R	Q	E	A	E	Q	A	R	A	Q	A	N	L	P	L	E	N	R	S	I	T	L	Q	Y	A	D	A	G	E	L	A	K	A	G	E	K	L	L	.	.	.	S	A	K	G	S	M	T	V	D	K	R	T	N	R	L	L	L	R	D	N	K	T	A	L	S	A	L	E	Q	W	V	A	Q	M	D	L	P
Query Conservation																																										.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	E	I	S	R	S	I	I	T	P	T	Y	L	D	I	D	S	L	L	K	Y	L	S	D	T	I	S	V	N	K	N	S	C	N	V	R	K	I	T	T	F	N	S	I	E	V	R	G	V	P	E	C	I	K	Y	I	T	S	L	S	E	S	L	D	K	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G									S	S	S										T	T	S	S					T	T							S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
															103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		178	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		170	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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