Job Description P34749 Confidence 1.88% Date Thu Jan 5 11:53:09 GMT 2012 Rank 96 Aligned Residues 67 % Identity 19% Template c2do4A_ PDB info PDB header:immune system Chain: A: PDB Molecule:squamous cell carcinoma antigen recognized by t- PDBTitle: solution structure of the rna binding domain of squamous2 cell carcinoma antigen recognized by t cells 3 Resolution UNK

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	A	Q	V	L	Q	A	L	A	E	Q	E	K	L	N	L	V	V	S	P	D	V	S	G	T	V	S	L	H	L	T	D	V	P	W	K	Q	A	L	Q	T	V	V	K	S	A	G	L	I	T	R	Q	E	G	N	I	L	S	V	H	S	I	A	W	Q	N	N	N
Query Conservation
Alig confidence																																																		.	.
Template Conservation																																																		.	.
Template Sequence		E	L	E	E	I	C	K	A	H	G	T	V	K	D	L	R	L	V	T	N	R	A	G	K	P	K	G	L	A	Y	V	E	Y	E	N	E	S	Q	A	S	Q	A	V	M	K	M	D	G	.	.	M	T	I	K	E	N	I	I	K	V	A	I	S	N	S	G	P	S	S
Template Known Secondary structure								T	T	T	S											T	T	S											S	S												T	T	.	.			S	S	S												S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		816	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.			.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions