Job Description P34749 Confidence 2.16% Date Thu Jan 5 11:53:09 GMT 2012 Rank 83 Aligned Residues 57 % Identity 9% Template c2dnoA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:trinucleotide repeat containing 4 variant; PDBTitle: solution structure of rna binding domain in trinucleotide2 repeat containing 4 variant Resolution UNK

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	T	L	M	V	D	D	V	P	V	A	Q	V	L	Q	A	L	A	E	Q	E	K	L	N	L	V	V	S	P	D	V	S	G	T	V	S	L	H	L	T	D	V	P	W	K	Q	A	L	Q	T	V	V	K	S	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	G	K	Q	Q	T	D	E	D	V	R	K	M	F	E	P	F	G	T	I	D	E	C	T	V	L	R	G	P	D	G	T	S	K	G	C	A	F	V	K	F	Q	T	H	A	E	A	Q	A	A	I	N	T	L	H	S
Template Known Secondary structure		S			S	S											G	G	G	S											T	T												S	S												T	T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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