Job Description P0ACK8 Confidence 83.32% Date Thu Jan 5 11:18:22 GMT 2012 Rank 371 Aligned Residues 77 % Identity 19% Template d2v7fa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Rps19E-like Resolution 1.15

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.											30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	Q	A	I	V	D	L	L	L	N	H	T	S	L	T	T	E	A	L	S	E	Q	L	K	.	.	.	.	.	.	.	.	.	.	V	S	K	E	T	I	R	R	D	L	N	E	L	Q	T	Q	G	K	I	L	R	N	H	G	R	A	K	Y	I	H	R	Q	N	Q	D	S	G	D	P	F	H	I	R	L	K
Query Conservation																											.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	V	A	S	I	L	R	R	V	Y	L	D	G	P	V	G	I	E	R	L	R	T	Y	Y	G	G	G	H	A	P	E	R	F	Y	K	A	G	G	S	I	I	R	K	A	L	Q	Q	L	E	A	A	G	F	V	E	K	V	P	G	K	G	R	V	I	T	P	K	G	R	S	F	L	D	K	I	A	T	E	L	K
Template Known Secondary structure															S	B															T	T	S																			T	T	S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
		75	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	Y	A	H	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	L	E	E	I	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions