Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK8
Confidence90.07%DateThu Jan 5 11:18:22 GMT 2012
Rank280Aligned Residues43
% Identity19%Templated2fswa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain HxlR-like
Resolution2.16

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20........ .30.........40.........50.
Predicted Secondary structure 


.





Query SS confidence 




















.






















Query Sequence  AIVDLLLNHTSLTTEALSEQL. KVSKETIRRDLNELQTQGKILRN
Query Conservation   

  
   
 
 
 


   . 

  





  

  
 
 
 
Alig confidence 






.












.






















Template Conservation   

  
 . 
  

 

   
  

   

 

  
   


 
 
Template Sequence  LIIFQIN. RRIIRYGELKRAIPGISEKXLIDELKFLCGKGLIKKK
Template Known Secondary structure  T.TS
STT

TTS
Template Predicted Secondary structure  .












Template SS confidence 












































   26...30.. .......40.........50.........60.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions