Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK8
Confidence86.38%DateThu Jan 5 11:18:22 GMT 2012
Rank331Aligned Residues57
% Identity11%Templated1lvaa4
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain C-terminal fragment of elongation factor SelB
Resolution2.12

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60
Predicted Secondary structure 














Query SS confidence 
























































Query Sequence  ARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGRAKYIHR
Query Conservation   
   

  
   
 
 
 


    

  





  

  
 
 
  


     
Alig confidence 
























































Template Conservation     
     
   
 

 
  

  
 





 


  
  
 
 
 

 



  
Template Sequence  GEAREVIKNLASTGPFGLAEARDALGSSRKYVLPLLEYLDQVKFTRRVGDKRVVVGN
Template Known Secondary structure  TTS
B
T

TTSTT


Template Predicted Secondary structure 















Template SS confidence 
























































   578.580.........590.........600.........610.........620.........630....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions