Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK8
Confidence96.97%DateThu Jan 5 11:18:22 GMT 2012
Rank101Aligned Residues49
% Identity20%Templated1lnwa_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50....
Predicted Secondary structure 











Query SS confidence 
















































Query Sequence  QQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQTQGKILRNHGR
Query Conservation     

  
   
 
 
 


    

  





  

  
 
 
  

Alig confidence 
















































Template Conservation     

  
      
  


    
    


 
  
   


 
    
Template Sequence  DVHVLKLIDEQRGLNLQDLGRQXCRDKALITRKIRELEGRNLVRRERNP
Template Known Secondary structure  SSTT
BTT

TTS
S
Template Predicted Secondary structure 









Template SS confidence 
















































   3940.........50.........60.........70.........80.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions