Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK8
Confidence97.82%DateThu Jan 5 11:18:22 GMT 2012
Rank39Aligned Residues55
% Identity31%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10......... 20.........30 .........40.........50........
Predicted Secondary structure 


.....

.







Query SS confidence 















. . . . .










.



























Query Sequence  ARQQAIVDLLLNHTSL. . . . . TTEALSEQLKV. SKETIRRDLNELQTQGKILRNHGRAKYI
Query Conservation   
   

  
   
 
..... 
 


    
.
  





  

  
 
 
  


   
Alig confidence 















.....










.



























Template Conservation   

  

 

       
  





    
  
  

  

  

 

 
 
     
 
Template Sequence  ARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGI
Template Known Secondary structure  SS


TT
SSTTS
SSSSS
Template Predicted Secondary structure 



















Template SS confidence 




























































   6...10.........20.........30.........40.........50.........60......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions