Job Description P0ACK8 Confidence 93.28% Date Thu Jan 5 11:18:22 GMT 2012 Rank 246 Aligned Residues 52 % Identity 25% Template c6paxA_ PDB info PDB header:gene regulation/dna Chain: A: PDB Molecule:homeobox protein pax-6; PDBTitle: crystal structure of the human pax-6 paired domain-dna2 complex reveals a general model for pax protein-dna3 interactions Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	K	A	A	R	Q	Q	A	I	V	D	L	L	L	N	H	T	S	L	T	T	E	A	L	S	E	Q	L	K	V	S	K	E	T	I	R	R	D	L	N	E	L	Q	T	Q	G	K	I	L	.	R	N	H	G	R
Query Conservation																																																			.
Alig confidence															.				.																																.
Template Conservation															.				.
Template Sequence		L	P	D	S	T	R	Q	R	I	V	E	L	A	.	H	S	G	.	A	R	P	C	D	I	S	R	I	L	Q	V	S	N	G	C	V	S	K	I	L	G	R	Y	Y	A	T	G	S	I	R	P	R	A	I	G	G
Template Known Secondary structure															.		T	T	.											T																	S			S					S
Template Predicted Secondary structure															.				.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions