 |
Job Description | P0ACK8 | Confidence | 88.85% | Date | Thu Jan 5 11:18:22 GMT 2012 |
Rank | 297 | Aligned Residues | 37 |
% Identity | 16% | Template | c3nrgA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:tetr family transcriptional regulator; |
PDBTitle: crystal structure of a tetr family transcriptional regulator2 (caur_2714) from chloroflexus aurantiacus j-10-fl at 2.56 a3 resolution
|
Resolution | 2.56 Å |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | |
|
|
|
. | . | . | . | . | |
|
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | A | A | R | Q | Q | A | I | V | D | L | . |
. |
. |
. |
L | L | N | H | T | . |
. |
S | L | T | T | E | A | L | S | E | Q | L | K | V | S | K | E | T | I | R | R |
Query Conservation |   |
|   |   |   |
|   |   |   |
|
|   |   | . | . | . | . |
|   |   |   |
| . | . |   |
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
|   |
Template Sequence |   |
L | P | E | E | K | R | S | R | L | I | D | V | L | L | D | E | F | A | Q | N | D | Y | D | S | V | S | I | N | R | I | T | E | R | A | G | I | A | K | G | S | F | Y | Q |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
| G | G | G |
|
|  |  |  |  |  |  |  |  | T |
|
| T | T | G | G | G | G |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|