Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACK8
Confidence74.10%DateThu Jan 5 11:18:22 GMT 2012
Rank458Aligned Residues39
% Identity26%Templatec3mkzU_
PDB info PDB header:dna-binding protein/dnaChain: U: PDB Molecule:protein sopb; PDBTitle: structure of sopb(155-272)-18mer complex, p21 form
Resolution2.98 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40..
Predicted Secondary structure 





Query SS confidence 






































Query Sequence  ARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNEL
Query Conservation   
   

  
   
 
 
 


    

  





  
Alig confidence 






































Template Conservation 
 
  
   
      

  

   
 


 


 


 
Template Sequence  ERGQRYASRLQNEFAGNISALADAENISRKIITRCINTA
Template Known Secondary structure  TT
TTT

Template Predicted Secondary structure 







Template SS confidence 






































   162.......170.........180.........190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions