Job Description P0ACK8 Confidence 97.93% Date Thu Jan 5 11:18:22 GMT 2012 Rank 32 Aligned Residues 150 % Identity 19% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

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		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	R	L	K	S	H	Y	A	H	K	A	D	I	A	R	E	A	L	A	W	I	E	E	G	M	V	I	A	L	D	A	S	S	T	C	W	Y	L	A	R	Q	L	P	D	I	N	I	Q	V	F	T	N	S	H	P	I	C	H	E	L	G	K	R	E	R	I	Q	L	I	S	S	G	G	T	L	E	R	K	Y
Query Conservation
Alig confidence																																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template Sequence		E	L	F	L	R	R	I	S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	.	.	V	L	R	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	.	.	.
Template Known Secondary structure																					T	T			T	T							S					.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T											T	T	T	.	.	.
Template Predicted Secondary structure																																						.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.															.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.																		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	Y	V	N	P	S	L	I	S	Q	L	K	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	D	L	F	I	F	S	C	E	G	I	D	S	S	G	A	L	W	D	S	N	A	I	N	A	D	Y	K	S	M	L	L	K	R	A	A	Q	S	L	L	L	I	D	K	S	K	F
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation		.	.																																																						.
Template Sequence		.	.	L	S	G	K	K	X	A	K	A	L	C	H	L	N	V	P	V	T	V	V	L	D	A	A	V	G	Y	I	X	E	K	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	I	G	.	T	N	Q	X	A	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F
Template Known Secondary structure		.	.	T											T	T	T								G	G	G					G	G	G		S							S				T	T	S						T	T	.											T	T									G	G	G	B
Template Predicted Secondary structure		.	.																																																						.
Template SS confidence
				159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		213	.	.	.																										.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	R	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R	I	G	H	L	D	E	V	T	H	I	I	S	D	E	R	Q	V	A	T	S	L	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	R	L	F	P	L	N	Q	Q	D	V	P	D	K	F	K	Y	K	A	D	G	Q	D	L	K	E	E	H	P	W	V	D	Y	T	A	P	S	L	I	T	L	L	F	T	D	L	G	V	L	T	P	S	A	V
Template Known Secondary structure			S				S	S	G	G	G	S						S	S					S							S						G	G	G		S					T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions