Job Description P0ACK8 Confidence 97.86% Date Thu Jan 5 11:18:22 GMT 2012 Rank 37 Aligned Residues 158 % Identity 13% Template c2yvkA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:methylthioribose-1-phosphate isomerase; PDBTitle: crystal structure of 5-methylthioribose 1-phosphate2 isomerase product complex from bacillus subtilis Resolution 2.40 Å

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		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.										100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.								.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.
Query Sequence		L	K	S	H	Y	A	H	K	A	D	I	A	R	E	A	L	A	W	I	E	E	G	M	V	I	A	L	.	.	.	.	.	.	.	.	.	D	A	S	S	T	C	W	Y	L	A	R	Q	L	.	.	P	D	I	N	I	Q	V	F	T	N	S	H	.	.	.	.	.	.	.	P	I	C	H	E	L	G	K	R	E
Query Conservation																													.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.														.	.													.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	E	D	E	E	T	C	R	L	I	G	Q	N	A	L	Q	L	F	K	K	G	D	R	I	M	T	I	C	N	A	G	S	I	A	T	S	R	Y	G	T	A	L	A	P	F	Y	L	A	K	Q	K	D	L	G	L	H	I	Y	A	C	E	T	R	P	V	L	Q	G	S	R	L	T	A	W	E	L	M	Q	G
Template Known Secondary structure																	G	G	G			T	T							S			S	T	T	T	S	S	S	S		S	T	T									T	T											T	T	T	T					T							T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	Q	L	I	S	S	G	G	T	L	E	R	K	Y	G	C	Y	V	N	P	S	L	I	S	Q	L	K	S	L	E	I	D	L	F	I	F	S	C	E	G	I	D	S	S	G	A	L	W	D	S	N	A	I	N	A	D	Y	K	S	M	L	L	K	R	A	A	Q	S	L	L	L	I	D	K	S	K	F	N	R
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.																																				.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		G	I	D	V	T	L	I	.	.	.	.	.	.	.	.	.	.	.	T	D	S	M	A	A	H	T	M	K	E	K	Q	I	S	A	V	I	V	G	A	D	R	I	A	K	N	G	D	T	A	N	K	I	G	.	T	Y	G	L	A	I	L	A	N	A	F	D	I	P	F	F	V	A	A	P	L	S	T	F	D	T
Template Known Secondary structure		T							.	.	.	.	.	.	.	.	.	.	.		G	G	G								T	T									S				T	T							T	T	.											T	T									G	G	G			T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		212	.	.	.	.	.	.												.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		215	.																																			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	R	I	G	H	L	D	E	V	T	H	I	I	S	D	E	R	Q	V	A	T	S	L	V	T
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	K	C	G	A	D	I	P	I	E	E	R	D	P	E	E	V	R	Q	I	S	G	V	R	T	A	P	S	N	V	P	V	F	N	P	A	F	D	I	T	P	H	D	L	I	S	G	I	I	T	E	K	G	I	M	T	G	N	Y	E	E
Template Known Secondary structure		T		S	S	G	G	G	S				B			T							T	T				S		T	T						B	S						G	G	G		S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions