Job Description P0ACK8 Confidence 97.95% Date Thu Jan 5 11:18:22 GMT 2012 Rank 29 Aligned Residues 185 % Identity 14% Template c2w48D_ PDB info PDB header:transcription Chain: D: PDB Molecule:sorbitol operon regulator; PDBTitle: crystal structure of the full-length sorbitol operon2 regulator sorc from klebsiella pneumoniae Resolution 3.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	A	R	Q	Q	A	I	V	D	L	L	L	N	H	T	S	L	T	T	E	A	L	S	E	Q	L	K	V	S	K	E	T	I	R	R	D	L	N	E	L	Q	T	Q	G	K	I	L	R	N	H	G	R	A	K	Y	I	H	R	Q	N	Q	D	S	G	D	P	F	H	I	R	L	K	S	H	Y	A	H	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence																																																			.	.	.	.	.																								.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		D	I	R	L	I	V	K	I	A	Q	L	Y	Y	E	Q	D	M	T	Q	A	Q	I	A	R	E	L	G	I	Y	R	T	T	I	S	R	L	L	K	R	G	R	E	Q	G	I	V	T	I	A	.	.	.	.	.	I	N	Y	D	Y	N	E	N	L	W	L	E	Q	Q	L	K	Q	K	F	G	L	K	E	A	V	V
Template Known Secondary structure		T														S												T			S													T	T	S	S				.	.	.	.	.			T	T																T		S
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
													80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	K	A	D	I	A	R	E	A	L	A	W	I	.	.	.	.	E	E	G	M	V	I	A	L	D	A	S	S	T	C	W	Y	L	A	R	Q	L	P	D	I	N	I	Q	V	F	T	N	S	H	P	I	C	H	E	L	G	K	R	E	R	I	Q	L	I	S	S	G	G	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.													.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	S	D	G	L	L	E	E	E	Q	L	S	A	M	G	Q	H	G	A	L	L	V	D	R	L	L	E	P	G	D	I	I	G	F	S	W	G	R	A	V	R	S	L	V	E	N	L	P	Q	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	S	R	Q	V	I	C	V	P	I	I	G	G
Template Known Secondary structure					S																									T	T								S									T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									S	B		B
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																.	.	.	.	.	.	.	.	140	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	E	R	K	Y	G	C	Y	V	N	.	.	P	S	L	I	S	Q	L	K	S	L	E	I	D	L	F	I	F	S	C	E	G	I	D	S	S	G	A	L	W	D	S	N	A	I	N	A	D	Y	K	S	M	L	L	K	R	A	A	Q	S	L	L	L	I
Query Conservation												.	.
Alig confidence												.	.
Template Conservation
Template Sequence		P	S	G	K	L	E	S	R	Y	H	V	N	T	L	T	Y	G	A	A	A	R	L	K	A	E	S	H	L	A	D	F	P	A	L	L	D	N	P	L	I	R	N	G	I	M	Q	S	Q	H	F	K	T	I	S	S	Y	W	D	S	L	D	V	A	L	V
Template Known Secondary structure			T	T	S	S		G	G	G														T								S	B	S	B		S										T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions