 |
Job Description | P0ACK8 | Confidence | 90.07% | Date | Thu Jan 5 11:18:22 GMT 2012 |
Rank | 279 | Aligned Residues | 46 |
% Identity | 24% | Template | c2vxzA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:pyrsv_gp04; |
PDBTitle: crystal structure of hypothetical protein pyrsv_gp04 from2 pyrobaculum spherical virus
|
Resolution | 1.7 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | Q | Q | A | I | V | D | L | L | L | N | H | T | S | L | T | T | E | A | L | S | E | Q | L | K | V | S | K | E | T | I | R | R | D | L | N | E | L | Q | T | Q | G | K | I | L | R | N |
Query Conservation |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |
|
|
|   |   |   |   |
|
|   |   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|   |
|
|
|
| . |
|
|
|
|
|
|   |
|   |   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |
|
Template Sequence |   |
R | L | R | D | I | L | A | L | L | A | D | . |
G | C | K | T | T | S | L | I | Q | Q | R | L | G | L | S | H | G | R | A | K | A | L | I | Y | V | L | E | K | E | G | R | V | T | R | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | . |
|
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|