Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA78
Confidence5.62%DateThu Jan 5 11:12:08 GMT 2012
Rank20Aligned Residues70
% Identity16%Templated2oara1
SCOP infoGated mechanosensitive channel Gated mechanosensitive channel Gated mechanosensitive channel
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   402.......410.........420.... .....430.........440.........450.........460....
Predicted Secondary structure  .................













Query SS confidence 






















. . . . . . . . . . . . . . . . .







































Query Sequence  ANGLTGMSAWLASTLFALVVGAL. . . . . . . . . . . . . . . . . ADTIGFSPLFAVLAVFDLLGALVIWTVLQNKPAIEVAQET
Query Conservation    
       

  
   
 
 
.................    
    
        
                     
Alig confidence 






















.................







































Template Conservation 
 

  

 


 


 


  
                    
 

 

 








 



 

   
        
Template Sequence  GTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEV
Template Known Secondary structure 







TTT

S

TTT

Template Predicted Secondary structure 

















Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   465....470.
Predicted Secondary structure 






Query SS confidence 






Query Sequence  HNDPAPQ
Query Conservation       

Alig confidence 






Template Conservation        
Template Sequence  EQPGDTQ
Template Known Secondary structure 

Template Predicted Secondary structure 





Template SS confidence 






   104.....110
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions