 |
Job Description | P0AA78 | Confidence | 4.39% | Date | Thu Jan 5 11:12:08 GMT 2012 |
Rank | 27 | Aligned Residues | 33 |
% Identity | 21% | Template | c3rkoF_ |
PDB info |
PDB header:oxidoreductase | Chain: F: PDB Molecule:nadh-quinone oxidoreductase subunit j; |
PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution
|
Resolution | 3.00 Å |
|
  |   |
428 | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 |
Predicted Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | F | S | P | L | F | A | V | L | A | V | F | D | L | L | G | A | L | V | I | W | T | V | L | Q | N | K | P | A | I | E | V |
Query Conservation |   |
  |
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
Template Sequence |   |
G | P | Y | V | L | A | V | E | L | A | S | M | L | L | L | A | G | L | V | V | A | F | H | V | G | R | E | E | R | A | G | E | V |
Template Known Secondary structure |   |
T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|