Job Description P0AA78 Confidence 2.81% Date Thu Jan 5 11:12:08 GMT 2012 Rank 57 Aligned Residues 51 % Identity 12% Template c3hfxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; PDBTitle: crystal structure of carnitine transporter Resolution 3.15 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	T	L	F	A	L	V	V	G	A	L	A	D	T	I	G	F	S	P	L	F	A	V	L	A	V	F	D	L	L	G	A	L	V	I	W	T	V	L	Q	N	K	P	A	I	E	V	A	Q	E	T	H	N	D	P	A	P	Q	H
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.
Template Sequence		A	N	V	V	I	N	A	V	F	S	Y	V	T	N	V	W	G	W	A	F	E	W	Y	M	V	V	M	L	F	G	W	F	W	L	V	F	G	P	Y	A	K	K	R	L	G	.	.	.	.	.	.	.	.	.	N	E	P	P	E	F
Template Known Secondary structure																																						S	S	S	T	T	S		S	S	.	.	.	.	.	.	.	.	.	S	S			S	S
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80										.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions