Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6W5
Confidence95.20%DateWed Jan 25 15:20:16 GMT 2012
Rank11Aligned Residues91
% Identity22%Templatec3gtyX_
PDB info PDB header:chaperone/ribosomal proteinChain: X: PDB Molecule:trigger factor; PDBTitle: promiscuous substrate recognition in folding and assembly activities2 of the trigger factor chaperone
Resolution3.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   56...60.........70.........80.........90.........100.........110.........120.........130.....
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  GFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEEQTYRIVGDDEADFKQNLISVNSPIARGLIGKEE
Query Conservation    

 

  
   
  
 

          
  

 
 
 
          


  
 
     

  



 



   
Alig confidence 




















.





































.........










Template Conservation 
 

  
             
.     

 
 

                   

     .........     


 
 
Template Sequence  KYVERRIEDLRESHALLEPKE. GPAEAGDLVRVNMEVYNEEGKKLTSREYEYVISEDEDR. . . . . . . . . PFVKDLVGKKK
Template Known Secondary structure  T



.S


TTS
TTS


SS


.........TTTT

T
Template Predicted Secondary structure 







.




















.........





Template SS confidence 















































































   132.......140.........150.. .......160.........170.........180.........190 .........200.
 
   136...140.... .....150......
Predicted Secondary structure 



....

Query SS confidence 








. . . .











Query Sequence  DDVVVIKTP. . . . GGEVEFEVIKVE
Query Conservation 

 
 
  
.... 
     
  
 
Alig confidence 








....











Template Conservation 

        


   
 
 
  

Template Sequence  GDVVEIEREYEGKKYTYKLEVEEVY
Template Known Secondary structure  T
TT
Template Predicted Secondary structure 






Template SS confidence 
























   202.......210.........220......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions