Job Description P0A6W5 Confidence 99.96% Date Wed Jan 25 15:20:16 GMT 2012 Rank 5 Aligned Residues 119 % Identity 29% Template c2pn0D_ PDB info PDB header:transcription Chain: D: PDB Molecule:prokaryotic transcription elongation factor PDBTitle: prokaryotic transcription elongation factor grea/greb from2 nitrosomonas europaea Resolution 1.70 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	E	I	I	A	A	I	A	E	A	R	E	H	G	D	L	K	E	N	A	E	Y	H	A	A	R	E	Q	Q	G	F	C	E	G	R	I	K	D	I	E	A	K	L	S	N	A	Q	V	I	D	V	T	K	M	P	N	N	G	R	V	I	F	G	A	T	V	T	V	L	N	L	D	S	D	E	E	Q	T	Y
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.																						.													.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.																						.													.
Template Sequence		K	P	K	I	X	I	S	S	L	D	A	E	R	L	E	I	L	L	E	T	L	S	F	P	G	R	.	.	.	.	.	.	.	.	.	.	.	D	D	L	E	A	E	L	A	R	A	E	V	V	D	P	E	E	I	P	P	T	.	V	V	T	X	N	S	T	V	R	F	R	V	.	E	S	S	A	E	E	F	L
Template Known Secondary structure																					T				T	T		.	.	.	.	.	.	.	.	.	.	.									T						G	G	G	S		T	T	.	B			T	T								.	T	T	S	S		B
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																						.													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.												30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		R	I	V	G	D	D	E	A	D	F	K	Q	N	L	I	S	V	N	S	P	I	A	R	G	L	I	G	K	E	E	D	D	V	V	V	I	K	T	P	G	G	.	E	V	E	F	E	V	I	K	V	E	Y
Query Conservation																																											.
Alig confidence																																											.
Template Conservation
Template Sequence		T	L	V	Y	P	K	D	V	D	T	S	G	E	K	I	S	I	L	A	P	V	G	S	A	L	L	G	L	A	Q	G	D	E	I	E	W	P	K	P	G	G	G	V	L	R	V	R	I	V	E	V	T	Y
Template Known Secondary structure						G	G	G			S	S	S	S				T	T	S	T	T					T	T		B	T	T								T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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