Job Description P0AF98 Confidence 5.20% Date Thu Jan 5 11:25:41 GMT 2012 Rank 10 Aligned Residues 120 % Identity 8% Template d1oeda_ SCOP info Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Neurotransmitter-gated ion-channel transmembrane pore Resolution 4.0

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	V	R	E	T	L	K	S	Q	L	A	I	L	F	I	L	L	L	I	F	F	C	Q	K	L	V	R	I	L	G	A	A	V	D	G	D	I	P	A	N	L	V	L	S	L	L	G	L	G	V	P	E	M	A	Q	L	I	L	P	L	S	L	F	L	G	L	L	M	T	L	G	K	L	Y	T	E	S	E	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	V	V	N	V	I	I	P	C	L	L	F	S	F	L	T	G	L	V	F	Y	L	P	T	D	S	G	E	K	M	T	L	S	I	S	V	L	L	S	L	T	V	F	L	L	V	I	V	E	L	I	P	S	T	S	S	A	V	P	L	I	G	K	Y	M	L	F	T	M	I	F	V	I	S	S	I	I	I	T	V
Template Known Secondary structure																												G	G	G																													S				T
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
		86	.	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure								.	.	.
Query SS confidence								.	.	.
Query Sequence		T	V	M	H	A	C	.	.	.	G	L	S	K	A	V	L	V	K	A	A	M	I	L	A	V	F	T	A	I	V	A	A	V	N	V	M	W	A	G	P	W	S	S
Query Conservation								.	.	.
Alig confidence								.	.	.
Template Conservation
Template Sequence		V	V	I	N	T	H	H	R	S	A	M	V	I	D	H	I	L	L	C	V	F	M	L	I	C	I	I	G	T	V	S	V	F	A	G	R	L	I	E	L	S	Q	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions