Job Description P0AF98 Confidence 5.02% Date Thu Jan 5 11:25:41 GMT 2012 Rank 12 Aligned Residues 66 % Identity 18% Template c3my2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:lipopolysaccharide export system protein lptc; PDBTitle: crystal structure of lptc Resolution 2.20 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	Q	I	R	P	K	G	N	A	R	P	S	V	V	V	A	D	S	G	H	L	T	Q	L	R	D	G	S	Q	V	V	T	L	N	Q	G	T	R	F	E	G	T	A	L	L	R	D	F	R	I	T	D	F	Q	D	Y	Q	A	I	I	G	H	Q	A	V	A	L	D	P
Query Conservation
Alig confidence																													.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		V	L	T	T	F	D	K	D	K	I	P	T	W	S	V	K	A	D	K	A	K	L	T	N	D	R	X	.	.	.	.	L	Y	L	Y	G	H	V	E	V	N	A	L	V	P	D	S	Q	L	R	R	I	T	T	D	N	A	Q	I	N	L	V	T	Q	D	V	T	S	E	D
Template Known Secondary structure								T	T										S						T	T	S		.	.	.	.													S	S	S		S													T	T	T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions