Job Description P0AF98 Confidence 2.22% Date Thu Jan 5 11:25:41 GMT 2012 Rank 74 Aligned Residues 95 % Identity 8% Template c3mkuA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter Resolution 4.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	L	V	F	T	V	F	M	M	A	L	M	V	V	P	L	S	V	V	N	P	R	Q	G	R	V	L	S	M	L	P	A	M	L	L	Y	L	L	F	F	L	I	Q	T	S	L	K	S	N	G	G	K	G	K	L	D	P	T	L	W	M	W	T	V	N	L	I	Y	L	A	L	A	I	V	L	N	L	W	D
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		I	Y	Q	C	M	D	A	V	Q	V	V	A	A	G	S	L	R	G	Y	K	D	M	T	A	I	F	H	R	T	F	I	S	Y	W	V	L	G	L	P	T	.	G	Y	I	L	G	M	T	N	W	L	T	E	Q	P	L	G	A	K	G	F	W	L	G	F	I	I	G	L	S	A	A	A	L	M	L	G	Q	R	L
Template Known Secondary structure																		G	G	G	S	S																				.									S	S	S			S																					T	G	G	G	S
Template Predicted Secondary structure																																										.
Template SS confidence
		366	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	V	P	V	R	R	L	R	A	S	F	S	R	K	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	W	L	Q	K	Q	S	D	D	V	Q	L	H	L	A	A
Template Known Secondary structure		T	T	T			S	S		T	T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions