Return to main results Retrieve Phyre Job Id

Job DescriptionP00864
Confidence48.88%DateThu Jan 5 10:56:57 GMT 2012
Rank48Aligned Residues30
% Identity27%Templated1vema2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   554.....560.........570....... ..580......
Predicted Secondary structure 


...







Query SS confidence 























. . .








Query Sequence  SWAQYQAQDALIKTCEKAGIELTL. . . FHGRGGSIG
Query Conservation   
 

 

  
       

 
  ...








Alig confidence 





...














...








Template Conservation 


 

... 
 

    




 




 

 


Template Sequence  DFSYAQ. . . RFAQSVKNAGMKMIPIISTHQCGGNVG
Template Known Secondary structure 

...TT

S
BSSSTT
Template Predicted Secondary structure 
...











Template SS confidence 



































   64..... 70.........80.........90......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions