 |
Job Description | P00864 | Confidence | 76.89% | Date | Thu Jan 5 10:56:57 GMT 2012 |
Rank | 34 | Aligned Residues | 82 |
% Identity | 24% | Template | c3khdC_ |
PDB info |
PDB header:transferase | Chain: C: PDB Molecule:pyruvate kinase; |
PDBTitle: crystal structure of pff1300w.
|
Resolution | 2.70 Å |
|
 |
  |   |
474 | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | S | M | A | K | T | P | S | D | V | L | A | V | H | L | L | L | K | E | A | G | I | G | F | A | M | P | V | A | P | L | F | E | T | L | D | D | L | N | N | A | N | D | V | M | T | Q | L | L | N | I | D | W | Y | R | G | L | I | Q | G | K | Q | M | V | M | I | G | Y | S | D | S | A | K | D | A | G | V | M | A | A |
Query Conservation |   |
|
|
|
|   |
|   |
|
|
|
|   |
|   |   |
|   |
|
|   |
|
|   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
  |
|
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
| . | . |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   |
|
|   |
|
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
| . | . | . | . | . | . |
Template Sequence |   |
A | S | F | I | Q | S | A | D | D | V | R | L | I | R | N | L | L | G | P | R | G | . |
. |
R | H | I | K | I | I | P | K | I | E | N | I | E | G | I | I | H | F | D | K | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | E | S | D | G | I | M | I | A | R | G | D | L | G | S | P | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |
| S |
|
| S | T | T |  |  |  |  |  |  |  |  |  | T | T | T | T | . | . | S | S | S |  |  |  |  |  |  |
| S |  |  |  |  |  | T |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  | S | S |
|  |  |  |
|  |  |  |  |
|
|
| . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
236 | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
|
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | |
|
|
|
|
|
  |
  |   |
554 | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | W | A | Q | Y | Q | A | Q | D | A | L | I | K | T | C | E | K | A | G | I | E | L | T | L |
Query Conservation |   |
  |
|   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |
|   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
Template Sequence |   |
. |
E | K | V | F | L | A | Q | K | L | M | I | S | K | C | N | L | Q | G | K | P | I | I | T |
Template Known Secondary structure |   |
. | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |
Template Predicted Secondary structure |   |
. |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
298 | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|