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Job DescriptionP00864
Confidence96.45%DateThu Jan 5 10:56:57 GMT 2012
Rank9Aligned Residues162
% Identity21%Templatec2vwtA_
PDB info PDB header:lyaseChain: A: PDB Molecule:yfau, 2-keto-3-deoxy sugar aldolase; PDBTitle: crystal structure of yfau, a metal ion dependent class ii2 aldolase from escherichia coli k12 - mg-pyruvate product3 complex
Resolution1.93 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   378.380.........390.........400.........410.........420.........430.........440.........450.......
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Query Sequence  DTLRRVKCFGVPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDT
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Template Sequence  YMAEIAATSGYDWLLIDG. EHAPNTIQDLYHQLQAVAP. . . . . . . . . . . . . . . . . . . YASQPVIRPVEGSKPLIKQVLDI
Template Known Secondary structure  TT

ST.TTS


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   30.........40....... ..50.........60...... ...70.........80.........
 
   458.460.........470.........480.........490........ .500.........510..
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Query Sequence  CQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFA. . . . . . . . . . . . . . . . . . . . . . . . . MPVAPLFETLDDLN
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Template Sequence  . . . . . . . . . . GAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALD
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GGGSGGGGGGTSTT

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   90.........100.........110.........120.........130.........140.........150.........
 
   513......520.........530.........540.........550... ......560.........570.........580
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Query Sequence  NANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAA. . SWAQYQAQDALIKTCEKAGIELTLFHG
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Template Sequence  NLDEIL. . . . . . . . . . . DVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV
Template Known Secondary structure  T...........TSTT


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   160..... ....170.........180.........190.........200.........210........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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