Return to main results Retrieve Phyre Job Id

Job DescriptionP00864
Confidence24.11%DateThu Jan 5 10:56:57 GMT 2012
Rank78Aligned Residues85
% Identity7%Templatec2hmcA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: the crystal structure of dihydrodipicolinate synthase dapa from2 agrobacterium tumefaciens
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   416...420.........430.........440.........450.........460.........470.........480.........490.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  GDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGI
Query Conservation    
  
 
  
   
  

   


       
    
 
     
   
  
 
 





 
 



 
  
 

 

Alig confidence 

























..



















































Template Conservation 

   

 


  
          

.. 

   

  

 

  
   




 
 

 
               
   
Template Sequence  GDWPLLTDEQRXEGVERLVKAGIPVI. . VGTGAVNTASAVAHAVHAQKVGAKGLXVIPRVLSRGSVIAAQKAHFKAILSA
Template Known Secondary structure  GTGGGS
TT

..


SST
S



SSSTT
Template Predicted Secondary structure 







..


















Template SS confidence 















































































   50.........60.........70..... ....80.........90.........100.........110.........120.......
 
   496...500..
Predicted Secondary structure 






Query SS confidence 






Query Sequence  GFAMPVA
Query Conservation     
 

Alig confidence 






Template Conservation 
   


Template Sequence  APEIPAV
Template Known Secondary structure  STTS
Template Predicted Secondary structure 




Template SS confidence 






   128.130....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions