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Job DescriptionP00864
Confidence100.00%DateThu Jan 5 10:56:57 GMT 2012
Rank2Aligned Residues861
% Identity42%Templatec1jqoA_
PDB info PDB header:lyaseChain: A: PDB Molecule:phosphoenolpyruvate carboxylase; PDBTitle: crystal structure of c4-form phosphoenolpyruvate carboxylase from2 maize
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50. ........60.........70.........80........
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Query Sequence  SNVSMLGKVLGETIKDALGEHILERVETIRKLSKSSRAGNDA. NRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQY
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Template Sequence  EYDALLVDRFLNILQDLHGPSLREFVQECYEVSADYEGKGDTTKLGELGAKLTGLAPADAILVASSILHMLNLANLAEEV
Template Known Secondary structure 


TS
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   36...40.........50.........60.........70.........80.........90.........100.........110.....
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  HSISPKGEAASNPEVIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQLDNKDIAD
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Template Sequence  QIAHRRRNSD. . . . . IEETLKRLVSEVGKSPEEVFEALKNQTVDLVFTAHPTQSARRSLLQKNARIRNCLTQLNAKDITD
Template Known Secondary structure 


.....TTS


T


TT

S
TT
TT

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   116...120..... ....130.........140.........150.........160.........170.........180.........190
 
   169170.........180.........190.........200.........210.........220.........230.. .......240.......
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Query Sequence  YEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENL. GYKLPVEFVPVRFTS
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Template Sequence  DDKQELDEALQREIQAAFRTDEIRRAQPTPQAEMRYGMSYIHETVWKGVPKFLRRVDTALKNIGINERLPYNVSLIRFSS
Template Known Secondary structure  S

S

S


TTTTTTTTTT

S


TT

S
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   208.210.........220.........230.........240.........250.........260.........270.........280.......
 
   248.250.........260.........270.........280.........290.........300..... ...
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Query Sequence  WMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIQVLVSELSMVEATPELLALVGE. . . . . . . . . . . . . . . . . . . EGA
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Template Sequence  WMGGDRDGNPRVTPEVTRDVCLLARMMAANLYIDQIEELMFELSMWRCNDELRVRAEELHSSSGSKVTKYYIEFWKQIPP
Template Known Secondary structure 
TTTB
TT
TTS












TT
SSS
S


T
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   288.290.........300.........310.........320.........330.........340.........350.........360.......
 
   309310.........320.........330... ......340.........350.........360.........370.........380.......
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Query Sequence  AEPYRYLMKNLRSRLMATQAWLEAR. LKGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFG
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Template Sequence  NEPYRVILGHVRDKLYNTRERARHLLASGVSEISAESSFTSIEEFLEPLELCYKSLCDCGDKAIADGSLLDLLRQVFTFG
Template Known Secondary structure  TSSS

SS
STTS

STS

TTTTTT
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   368.370.........380.........390.........400.........410.........420.........430.........440.......
 
   388.390.........400.........410.........420.........430.........440.........450.........460.......
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Query Sequence  VPLVRIDIRQESTRHTEALGELTRYLGIGDYESWSEADKQAFLIRELNSKRPLLPRNWQPSAETREVLDTCQVIAEAPQG
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Template Sequence  LSLVKLDIRQESERHTDVIDAITTHLGIGSYREWPEDKRQEWLLSELRGKRPLLPPDLPQTDEIADVIGAFHVLAELPPD
Template Known Secondary structure  TSSS

TS

STTS


S



TT



S
ST
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   448.450.........460.........470.........480.........490.........500.........510.........520.......
 
   468.470.........480.........490.........500.........510.........520.........530.........540.......
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Query Sequence  SIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKD
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Template Sequence  SFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDRIKGKQQVMVGYSDSGKD
Template Known Secondary structure  TTT

STT

SS



STT
TSSTT
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   528.530.........540.........550.........560.........570.........580.........590.........600.......
 
   548.550.........560.........570.........580.........590.........600.........610.........620.......
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Query Sequence  AGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEIT
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Template Sequence  AGRLSAAWQLYRAQEEMAQVAKRYGVKLTLFHGRGGTVGRGGGPTHLAILSQPPDTINGSIRVTVQGEVIEFCFGEEHLC
Template Known Secondary structure  S
TTT


SSGGGT


TS
TTS
TTSS
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   608.610.........620.........630.........640.........650.........660.........670.........680.......
 
   628.630.........640.........650.........660.........670.........680.........690.........700.......
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Query Sequence  VSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTG
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Template Sequence  FQTLQRFTAATLEHGMHPPVSPKPEWRKLMDEMAVVATEEYRSVVVKEARFVEYFRSATPETEYGRMNIGSRP. . . . . . .
Template Known Secondary structure  S





TT
TTS

GGGGGG

S


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   688.690.........700.........710.........720.........730.........740.........750.........760
 
   708.710.........720.........730.........740..... ....750.........760.........770.........780.....
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Query Sequence  GVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDG. . KQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQR
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Template Sequence  . ITTLRAIPWIFSWTQTRFHLPVWLGVGAAFKFAIDKDVRNFQVLKEMYNEWPFFRVTLDLLEMVFAKGDPGIAGLYDEL
Template Known Secondary structure  .
TT

STT

TT
TT
TT

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   769770.........780.........790.........800.........810.........820.........830.........840.......
 
   786...790.........800.........810.........820.........830.........840.........850......
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Query Sequence  LVDKALWPLGKELRNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE. . . . . . . . .
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Template Sequence  LVAEELKPFGKQLRDKYVETQQLLLQIAGHKDILEGDPFLKQGLVLRNPYITTLNVFQAYTLKRIRDPNFKVTPQPPLSK
Template Known Secondary structure  TS
STTT
SSTTSS

TT








S
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   848.850.........860.........870.........880.........890.........900.........910.........920.......
 
   857..860.........870.........880...
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Query Sequence  . . . . . . . . . GQEPDPRVEQALMVTIAGIAAGMRNTG
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Template Sequence  EAGLVKLNPASEYPPGLEDTLILTMKGIAAGMQNTG
Template Known Secondary structure 

TTTTTSSS
SS
TTT


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   928.930.........940.........950.........960...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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